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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA849822 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
838704 838704 PRJNA849822_P_NODE_40901_length_244_cov_1.748538_g40727_i0 PRJNA849822 40901 244 1.748538 4.26643272 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 93.5 1.3e-14   NTclustered gi|301111441|ref|XM_002904754.1| 403677 g40727 i0 88.312 0.631147540983607 77 9 32 0 154 230 1390 1314 Phytophthora infestans T30-4 NADH dehydrogenase flavoprotein 1, mitochondrial precursor (PITG_06815), mRNA blastn 154 93.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
838763 838763 PRJNA849822_P_NODE_7001_length_582_cov_7.180747_g6832_i0 PRJNA849822 7001 582 7.180747 41.79194754 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 281 6.74e-71   NTclustered gi|698807229|ref|XM_009838342.1| 112090 g6832 i0 80.533 58.1237113402062 375 65 63 4 191 558 441 68 Aphanomyces astaci polyubiquitin mRNA blastn 33828 281 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
1233458 1233458 PRJNA849822_P_NODE_2881_length_963_cov_1.857303_g2740_i0 PRJNA849822 2881 963 1.857303 17.88582789 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 667 0   NTclustered gi|2795054652|ref|XM_067932801.1| 4785 g2740 i0 81.459 82.3167185877466 836 135 86 18 105 930 1236 411 Phytophthora cinnamomi ATP-dependent RNA helicase eIF4A (IUM83_08428), partial mRNA blastn 79271 667 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
3389330 3389330 PRJNA849822_P_NODE_28823_length_272_cov_1.351759_g28649_i0 PRJNA849822 28823 272 1.351759 3.67678448 Saprolegnia ferax 4770 SAR_Eukaryotes SAR_Eukaryotes 132 3.1200000000000003e-26   NTclustered gi|50261276|ref|NC_005984.1| 4770 g28649 i0 80.337 14.3455882352941 178 31 65 4 96 271 45657 45482 Saprolegnia ferax mitochondrion, complete genome blastn 3902 132 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia ferax
3389538 3389538 PRJNA849822_P_NODE_9523_length_486_cov_2.288136_g9350_i0 PRJNA849822 9523 486 2.288136 11.12034096 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 267 1.55e-66   NTclustered gi|2794877204|ref|XM_067892388.1| 164328 g9350 i0 80.223 8.92592592592593 359 67 73 4 121 477 64 420 Phytophthora ramorum 40S ribosomal protein S14 (KRP23_72), partial mRNA blastn 4338 267 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
3785497 3785497 PRJNA849822_P_NODE_6823_length_591_cov_1.530888_g6654_i0 PRJNA849822 6823 591 1.530888 9.04754808 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 449 1.7699999999999998e-121   NTclustered gi|9858457|gb|AF085344.1|AF085344 82926 g6654 i0 85.135 51.5194585448393 444 61 75 4 3 444 43 483 Pythium splendens calmodulin mRNA, complete cds blastn 30448 449 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium Globisporangium splendens
7216869 7216869 PRJNA849822_P_NODE_44126_length_202_cov_4.178295_g43952_i0 PRJNA849822 44126 202 4.178295 8.4401559 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 117 6.15e-22   NTclustered gi|673042992|ref|XM_008877235.1| 157072 g43952 i0 86.111 0.534653465346535 108 15 53 0 94 201 135 242 Aphanomyces invadans UPF0468 protein mRNA blastn 108 117 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
8491314 8491314 PRJNA849822_P_NODE_10387_length_462_cov_6.889460_g10214_i0 PRJNA849822 10387 462 6.88946 31.8293052 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 244 6.89e-60   NTclustered gi|673039884|ref|XM_008875681.1| 157072 g10214 i0 77.305 18.5844155844156 423 90 91 6 19 438 31 450 Aphanomyces invadans 60S ribosomal protein mRNA blastn 8586 244 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
9766680 9766680 PRJNA849822_P_NODE_27648_length_277_cov_1.941176_g27474_i0 PRJNA849822 27648 277 1.941176 5.37705752 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 257 5.03e-64   NTclustered gi|301113823|ref|XM_002998636.1| 403677 g27474 i0 84.151 57.9963898916968 265 42 96 0 13 277 1207 943 Phytophthora infestans T30-4 ATP synthase subunit beta, putative (PITG_06595), partial mRNA blastn 16065 257 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
9766867 9766867 PRJNA849822_P_NODE_9248_length_494_cov_1.717340_g9075_i0 PRJNA849822 9248 494 1.71734 8.4836596 Plectospira myriandra 100863 SAR_Eukaryotes SAR_Eukaryotes 289 3.38e-73   NTclustered gi|59894157|gb|AY729861.1| 100863 g9075 i0 77.624 7.37246963562753 505 93 99 15 1 492 1098 601 Plectospira myriandra heat shock protein 90 gene, partial cds blastn 3642 289 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Plectospira Plectospira myriandra
11042237 11042237 PRJNA849822_P_NODE_22789_length_303_cov_2.034783_g22615_i0 PRJNA849822 22789 303 2.034783 6.16539249 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 171 7.469999999999999e-38   NTclustered gi|2795036376|ref|XM_067936376.1| 4785 g22615 i0 81.221 17.4125412541254 213 38 70 2 3 214 224 435 Phytophthora cinnamomi 40S ribosomal protein S16 (IUM83_11796), partial mRNA blastn 5276 171 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
13592221 13592221 PRJNA849822_P_NODE_15971_length_363_cov_1.810345_g15797_i0 PRJNA849822 15971 363 1.810345 6.57155235 Phytophthora richardiae 127443 SAR_Eukaryotes SAR_Eukaryotes 228 5.329999999999998e-55   NTclustered gi|156986743|gb|EU079541.1| 127443 g15797 i0 78.378 32.7741046831956 370 66 100 10 1 363 483 845 Phytophthora richardiae isolate PD_00090(P10358) heat shock protein 90 (HSP90) gene, partial cds blastn 11897 228 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora richardiae
14866619 14866619 PRJNA849822_P_NODE_28472_length_274_cov_0.995025_g28298_i0 PRJNA849822 28472 274 0.995025 2.7263685 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 167 8.609999999999999e-37   NTclustered gi|2795017814|ref|XM_067936785.1| 4785 g28298 i0 82.292 2.01459854014599 192 34 70 0 48 239 440 249 Phytophthora cinnamomi 60S ribosomal protein L10a-1 (IUM83_12178), partial mRNA blastn 552 167 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
14866798 14866798 PRJNA849822_P_NODE_9832_length_478_cov_1.343210_g9659_i0 PRJNA849822 9832 478 1.34321 6.4205438 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 436 1.1e-117   NTclustered gi|673019533|ref|XM_008865506.1| 157072 g9659 i0 84.919 89.7029288702929 431 65 90 0 2 432 539 109 Aphanomyces invadans hypothetical protein mRNA blastn 42878 436 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
16141327 16141327 PRJNA849822_P_NODE_24313_length_294_cov_1.031674_g24139_i0 PRJNA849822 24313 294 1.031674 3.03312156 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 99 3.45e-16   NTclustered gi|698791027|ref|XM_009830244.1| 112090 g24139 i0 77.439 0.557823129251701 164 37 56 0 25 188 16 179 Aphanomyces astaci hypothetical protein partial mRNA blastn 164 99 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
17416975 17416975 PRJNA849822_P_NODE_6074_length_632_cov_1.327370_g5905_i0 PRJNA849822 6074 632 1.32737 8.3889784 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 183 2.13e-41   NTclustered gi|301093299|ref|XM_002997452.1| 403677 g5905 i0 76.253 30.7879746835443 379 71 59 11 161 534 169 533 Phytophthora infestans T30-4 nascent polypeptide-associated complex subunit alpha-like protein, putative (PITG_19008), partial mRNA blastn 19458 183 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
17810933 17810933 PRJNA849822_P_NODE_21534_length_312_cov_2.284519_g21360_i0 PRJNA849822 21534 312 2.284519 7.12769928 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 268 2.66e-67   NTclustered gi|695393603|ref|XM_009522363.1| 67593 g21360 i0 82.792 98.8301282051282 308 45 97 8 8 310 954 650 Phytophthora sojae hypothetical protein mRNA blastn 30835 268 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
18689943 18689943 PRJNA849822_P_NODE_27255_length_279_cov_1.514563_g27081_i0 PRJNA849822 27255 279 1.514563 4.22563077 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 139 1.92e-28   NTclustered gi|2795030968|ref|XM_067936713.1| 4785 g27081 i0 82.5 1.72043010752688 160 26 57 2 71 229 330 172 Phytophthora cinnamomi sporangia induced deflagellation-inducible protein (IUM83_12111), partial mRNA blastn 480 139 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
19964989 19964989 PRJNA849822_P_NODE_18856_length_333_cov_1.500000_g18682_i0 PRJNA849822 18856 333 1.5 4.995 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 193 1.77e-44   NTclustered gi|698802469|ref|XM_009835962.1| 112090 g18682 i0 81.739 41.6696696696697 230 42 69 0 1 230 740 969 Aphanomyces astaci V-type H(+)-translocating pyrophosphatase mRNA blastn 13876 193 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
19965087 19965087 PRJNA849822_P_NODE_30776_length_263_cov_3.563158_g30602_i0 PRJNA849822 30776 263 3.563158 9.37110554 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 104 6.54e-18   NTclustered gi|673042388|ref|XM_008876933.1| 157072 g30602 i0 91.892 6.80228136882129 74 6 28 0 80 153 151 224 Aphanomyces invadans 60S ribosomal protein L39 mRNA blastn 1789 104 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
20359941 20359941 PRJNA849822_P_NODE_6016_length_636_cov_1.500888_g5847_i0 PRJNA849822 6016 636 1.500888 9.54564768 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 486 1.4599999999999997e-132   NTclustered gi|2795052452|ref|XM_067926699.1| 4785 g5847 i0 86.728 41.9072327044025 437 58 69 0 103 539 506 70 Phytophthora cinnamomi caltractin (IUM83_02754), partial mRNA blastn 26653 486 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
21240637 21240637 PRJNA849822_P_NODE_22797_length_303_cov_1.908696_g22623_i0 PRJNA849822 22797 303 1.908696 5.78334888 Achlya bisexualis 4766 SAR_Eukaryotes SAR_Eukaryotes 248 3.3499999999999995e-61   NTclustered gi|2289|emb|X59936.1| 4766 g22623 i0 87.156 68.8943894389439 218 28 72 0 2 219 218 1 A.bisexualis gene for actin blastn 20875 248 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya bisexualis
21635569 21635569 PRJNA849822_P_NODE_22837_length_303_cov_1.356522_g22663_i0 PRJNA849822 22837 303 1.356522 4.11026166 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 62.1 4.69e-5   NTclustered gi|813171669|ref|XM_012349200.1| 695850 g22663 i0 93.023 0.66006600660066 43 2 14 1 250 292 322 363 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 200 62.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
23790982 23790982 PRJNA849822_P_NODE_4619_length_738_cov_2.106767_g4455_i0 PRJNA849822 4619 738 2.106767 15.54794046 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 507 1.31e-138   NTclustered gi|2795038286|ref|XM_067939758.1| 4785 g4455 i0 79.555 93.310298102981 719 139 97 8 24 738 832 1546 Phytophthora cinnamomi Chaperone dnaK (IUM83_14977), partial mRNA blastn 68863 507 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;