RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849822 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10162025 10162025 PRJNA849822_P_NODE_28908_length_272_cov_0.919598_g28734_i0 PRJNA849822 28908 272 0.919598 2.50130656 root 1 Root_unresolved Root_unresolved 54.7 0.007   NTclustered gi|2652376277|gb|CP142136.1| 29562 g28734 i0 96.97 39.5882352941176 33 0 12 1 171 203 615634 615603 Mesomycoplasma ovipneumoniae strain GH 3-3 chromosome, complete genome blastn 10768 54.7 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma ovipneumoniae
12713068 12713068 PRJNA849822_P_NODE_19650_length_327_cov_0.803150_g19476_i0 PRJNA849822 19650 327 0.80315 2.6263005 Mesomycoplasma 2923352 Bacteria Bacteria 52.8 0.031   NTclustered gi|2717001259|gb|CP145983.1| 29562 g19476 i0 94.286 0.321100917431193 35 1 10 1 261 294 818505 818539 Mesomycoplasma ovipneumoniae strain OARF2_122 chromosome, complete genome blastn 105 52.8 1 Bacteria   Bacillati Mycoplasmatota   Mycoplasmoidales Metamycoplasmataceae Mesomycoplasma Mesomycoplasma ovipneumoniae
16141281 16141281 PRJNA849822_P_NODE_18133_length_340_cov_1.168539_g17959_i0 PRJNA849822 18133 340 1.168539 3.9730326 Mycoplasma feriruminatoris 1179777 Bacteria Bacteria 54.7 0.009   NTclustered gi|1795739732|emb|LR739237.1| 1179777 g17959 i0 96.97 0.194117647058824 33 0 10 1 239 271 591134 591103 Mycoplasma feriruminatoris 14/OD_0492 chromosome : 1 blastn 66 54.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma feriruminatoris
22515265 22515265 PRJNA849822_P_NODE_13558_length_398_cov_1.181538_g13384_i0 PRJNA849822 13558 398 1.181538 4.70252124 Mycoplasma yeatsii 51365 Bacteria Bacteria 62.1 6.33e-5   NTclustered gi|756767228|gb|CP007520.1| 743967 g13384 i0 80.723 1.23618090452261 83 13 20 3 312 392 762304 762385 Mycoplasma yeatsii GM274B blastn 492 62.1 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma yeatsii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;