RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Evosea · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA849822 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
838468 838468 PRJNA849822_P_NODE_11301_length_441_cov_1.342391_g11127_i0 PRJNA849822 11301 441 1.342391 5.91994431 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52.8 0.043   NTclustered gi|470246793|ref|XM_004366493.1| 261658 g11127 i0 100 0.0634920634920635 28 0 6 0 196 223 416 443 Cavenderia fasciculata uncharacterized protein (DFA_04141), partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
838618 838618 PRJNA849822_P_NODE_30341_length_265_cov_1.796875_g30167_i0 PRJNA849822 30341 265 1.796875 4.76171875 Dictyostelium purpureum 5786 Evosea other_Eukaryota 207 4.88e-49   NTclustered gi|330842214|ref|XM_003293030.1| 5786 g30167 i0 81.111 75.7056603773585 270 41 100 10 1 265 447 183 Dictyostelium purpureum uncharacterized protein (rac1A), mRNA blastn 20062 207 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
1233485 1233485 PRJNA849822_P_NODE_37421_length_248_cov_1.811429_g37247_i0 PRJNA849822 37421 248 1.811429 4.49234392 root 1 Root_unresolved Root_unresolved 87.9 6.15e-13   NTclustered gi|67465833|ref|XM_643983.1| 294381 g37247 i0 91.935 5.59677419354839 62 5 25 0 27 88 2235 2296 Entamoeba histolytica HM-1:IMSS exosome complex exonuclease, putative (EHI_160720), partial mRNA blastn 1388 87.9 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
3785446 3785446 PRJNA849822_P_NODE_27163_length_280_cov_1.077295_g26989_i0 PRJNA849822 27163 280 1.077295 3.016426 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.002   NTclustered gi|330802390|ref|XM_003289153.1| 5786 g26989 i0 100 0.557142857142857 30 0 11 0 151 180 2562 2533 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_153527), partial mRNA blastn 156 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
4667003 4667003 PRJNA849822_P_NODE_17144_length_350_cov_1.978339_g16970_i0 PRJNA849822 17144 350 1.978339 6.9241865 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.033   NTclustered gi|66817421|ref|XM_637472.1| 352472 g16970 i0 100 0.08 28 0 8 0 12 39 375 402 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0277581) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
7216776 7216776 PRJNA849822_P_NODE_32346_length_257_cov_1.559783_g32172_i0 PRJNA849822 32346 257 1.559783 4.00864231 Dictyostelium purpureum 5786 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|330796780|ref|XM_003286395.1| 5786 g32172 i0 100 0.11284046692607 29 0 11 0 207 235 1402 1430 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_87156), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
7216884 7216884 PRJNA849822_P_NODE_5246_length_686_cov_2.150082_g5079_i0 PRJNA849822 5246 686 2.150082 14.74956252 Dictyostelium discoideum 44689 Evosea other_Eukaryota 327 1.02e-84   NTclustered gi|5007075|gb|AF153328.1| 44689 g5079 i0 78.195 47.5145772594752 532 102 77 12 27 551 2 526 Dictyostelium discoideum Rac1C (rac1C) mRNA, complete cds blastn 32595 327 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11042158 11042158 PRJNA849822_P_NODE_13109_length_405_cov_1.897590_g12935_i0 PRJNA849822 13109 405 1.89759 7.6852395 Dictyostelium discoideum 44689 Evosea other_Eukaryota 58.4 8.35e-4   NTclustered gi|66817215|ref|XM_637394.1| 352472 g12935 i0 97.059 0.0839506172839506 34 1 8 0 256 289 211 178 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0277749) mRNA, complete cds blastn 34 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11042307 11042307 PRJNA849822_P_NODE_32109_length_258_cov_1.394595_g31935_i0 PRJNA849822 32109 258 1.394595 3.5980551 Dictyostelium discoideum 44689 Evosea other_Eukaryota 52.8 0.023   NTclustered gi|166240052|ref|XM_640924.2| 352472 g31935 i0 100 0.108527131782946 28 0 11 0 103 130 310 283 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0269502) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11042365 11042365 PRJNA849822_P_NODE_42409_length_243_cov_0.917647_g42235_i0 PRJNA849822 42409 243 0.917647 2.22988221 Dictyostelium discoideum 44689 Evosea other_Eukaryota 172 1.6099999999999996e-38   NTclustered gi|66828894|ref|XM_642709.1| 352472 g42235 i0 86.928 10.7489711934156 153 20 63 0 21 173 1240 1392 Dictyostelium discoideum AX4 protein transport protein SEC61 alpha subunit (sec61a) mRNA, complete cds blastn 2612 172 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
11437216 11437216 PRJNA849822_P_NODE_12449_length_417_cov_1.622093_g12275_i0 PRJNA849822 12449 417 1.622093 6.76412781 Acytosteliales 2058181 Evosea other_Eukaryota 54.7 0.011   NTclustered gi|470239072|ref|XM_004351250.1| 261658 g12275 i0 96.875 0.146282973621103 32 1 8 0 349 380 2007 1976 Cavenderia fasciculata peptidase C19 family protein (DFA_10659), partial mRNA blastn 61 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
14866576 14866576 PRJNA849822_P_NODE_22092_length_308_cov_1.659574_g21918_i0 PRJNA849822 22092 308 1.659574 5.11148792 Cavenderia fasciculata 261658 Evosea other_Eukaryota 278 4.36e-70   NTclustered gi|470262405|ref|XM_004360607.1| 261658 g21918 i0 86.508 40.737012987013 252 34 82 0 50 301 16 267 Cavenderia fasciculata Rab GTPase (rab2A), partial mRNA blastn 12547 278 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
14866671 14866671 PRJNA849822_P_NODE_36492_length_250_cov_0.864407_g36318_i0 PRJNA849822 36492 250 0.864407 2.1610175 Heterostelium album 2086695 Evosea other_Eukaryota 58.4 4.87e-4   NTclustered gi|1160567972|ref|XM_020581230.1| 670386 g36318 i0 97.059 0.252 34 1 14 0 1 34 2394 2427 Polysphondylium pallidum PN500 Ras guanine nucleotide exchange factor (gefN), partial mRNA blastn 63 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
16141264 16141264 PRJNA849822_P_NODE_1633_length_1270_cov_1.884712_g1533_i0 PRJNA849822 1633 1270 1.884712 23.9358424 Dictyostelium purpureum 5786 Evosea other_Eukaryota 1151 0   NTclustered gi|330795360|ref|XM_003285694.1| 5786 g1533 i0 85.623 85.503937007874 1099 154 86 4 174 1270 1155 59 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_91566), mRNA blastn 108590 1151 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17416832 17416832 PRJNA849822_P_NODE_27414_length_278_cov_4.248780_g27240_i0 PRJNA849822 27414 278 4.24878 11.8116084 Dictyostelium purpureum 5786 Evosea other_Eukaryota 183 8.7e-42   NTclustered gi|330845026|ref|XM_003294357.1| 5786 g27240 i0 81.532 11.2122302158273 222 41 80 0 34 255 466 245 Dictyostelium purpureum uncharacterized protein (rasC), mRNA blastn 3117 183 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17416864 17416864 PRJNA849822_P_NODE_30614_length_264_cov_1.633508_g30440_i0 PRJNA849822 30614 264 1.633508 4.31246112 Dictyostelium purpureum 5786 Evosea other_Eukaryota 110 1.41e-19   NTclustered gi|330805769|ref|XM_003290803.1| 5786 g30440 i0 81.818 0.5 132 22 50 2 79 209 34 164 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_49487), mRNA blastn 132 110 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18689813 18689813 PRJNA849822_P_NODE_12215_length_421_cov_6.612069_g12041_i0 PRJNA849822 12215 421 6.612069 27.83681049 Entamoeba nuttalli 412467 Evosea other_Eukaryota 196 1.7699999999999998e-45   NTclustered gi|672810997|ref|XM_008862315.1| 1076696 g12041 i0 80.228 4.84085510688836 263 50 62 2 16 277 7 268 Entamoeba nuttalli P19 ribosomal S17 protein partial mRNA blastn 2038 196 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
18689836 18689836 PRJNA849822_P_NODE_15035_length_375_cov_1.622517_g14861_i0 PRJNA849822 15035 375 1.622517 6.08443875 Dictyostelium purpureum 5786 Evosea other_Eukaryota 60.2 2.13e-4   NTclustered gi|330818806|ref|XM_003291481.1| 5786 g14861 i0 94.737 8.69333333333333 38 2 10 0 172 209 249 212 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_82197), partial mRNA blastn 3260 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21240700 21240700 PRJNA849822_P_NODE_31237_length_261_cov_2.202128_g31063_i0 PRJNA849822 31237 261 2.202128 5.74755408 Entamoeba nuttalli 412467 Evosea other_Eukaryota 161 3.79e-35   NTclustered gi|672810007|ref|XM_008861820.1| 1076696 g31063 i0 78.903 2.727969348659 237 50 91 0 23 259 1185 949 Entamoeba nuttalli P19 26S protease regulatory subunit, putative partial mRNA blastn 712 161 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
22515427 22515427 PRJNA849822_P_NODE_34938_length_251_cov_1.556180_g34764_i0 PRJNA849822 34938 251 1.55618 3.9060118 Dictyostelium discoideum 44689 Evosea other_Eukaryota 128 3.67e-25   NTclustered gi|66819634|ref|XM_638385.1| 352472 g34764 i0 80.838 0.665338645418327 167 29 66 3 87 251 172 7 Dictyostelium discoideum AX4 type A von Willebrand factor domain-containing protein (psmD4) mRNA, complete cds blastn 167 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
23790851 23790851 PRJNA849822_P_NODE_25519_length_288_cov_1.009302_g25345_i0 PRJNA849822 25519 288 1.009302 2.90678976 Heterostelium album 2086695 Evosea other_Eukaryota 182 3.26e-41   NTclustered gi|1160575692|ref|XM_020582586.1| 670386 g25345 i0 78.246 15.1215277777778 285 60 99 2 4 287 389 106 Polysphondylium pallidum PN500 Ras GTPase (rasW), partial mRNA blastn 4355 182 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;