RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA849822 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4667153 4667153 PRJNA849822_P_NODE_38584_length_247_cov_0.896552_g38410_i0 PRJNA849822 38584 247 0.896552 2.21448344 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 54.7 0.006   NTclustered gi|1752368869|ref|XM_778596.5| 7668 g38410 i0 100 2.07692307692308 29 0 12 0 219 247 1008 980 PREDICTED: Strongylocentrotus purpuratus RNA-binding protein 28 (LOC578427), mRNA blastn 513 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
7216947 7216947 PRJNA849822_P_NODE_9926_length_475_cov_2.009950_g9753_i0 PRJNA849822 9926 475 2.00995 9.5472625 Asterias rubens 7604 Echinodermata other_Eukaryota 71.3 1.28e-7   NTclustered gi|1834301632|ref|XM_033770905.1| 7604 g9753 i0 93.617 0.183157894736842 47 3 10 0 428 474 1417 1371 PREDICTED: Asterias rubens tubulin beta chain-like (LOC117289675), transcript variant X2, mRNA blastn 87 71.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;