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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA849822 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2114079 2114079 PRJNA849822_P_NODE_34202_length_252_cov_1.262570_g34028_i0 PRJNA849822 34202 252 1.26257 3.1816764 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 3.72e-20   NTclustered gi|1755631453|dbj|LC472811.1| 5755 g34028 i0 81.752 2.64285714285714 137 21 54 4 99 233 366 500 Acanthamoeba castellanii ATCC 30011 mRNA for cysteine proteinase 5 blastn 666 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3389403 3389403 PRJNA849822_P_NODE_3743_length_833_cov_2.647368_g3584_i0 PRJNA849822 3743 833 2.647368 22.05257544 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 725 0   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g3584 i0 82.437 98.1632653061225 837 139 100 8 1 833 1263 2095 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 81770 725 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7611613 7611613 PRJNA849822_P_NODE_8366_length_523_cov_10.942222_g8194_i0 PRJNA849822 8366 523 10.942222 57.22782106 Vannellidae 95227 Discosea other_Eukaryota 778 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g8194 i0 93.893 100.606118546845 524 19 100 11 1 523 1671 1160 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 52617 785 0.991082802547771 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
9766686 9766686 PRJNA849822_P_NODE_28268_length_274_cov_5.980100_g28094_i0 PRJNA849822 28268 274 5.9801 16.385474 Vannella septentrionalis 197531 Discosea other_Eukaryota 490 4.499999999999999e-134   NTclustered gi|300078499|gb|GU001161.1| 197531 g28094 i0 98.905 30.4963503649635 274 3 100 0 1 274 4069 4342 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8356 490 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
10162071 10162071 PRJNA849822_P_NODE_8628_length_514_cov_2.369615_g8456_i0 PRJNA849822 8628 514 2.369615 12.1798211 Vannella 95228 Discosea other_Eukaryota 939 0   NTclustered gi|399764235|gb|JQ271746.1| 1215650 g8456 i0 99.611 99.1945525291829 514 2 100 0 1 514 1430 1943 Vannella sp. LITHOV 18S ribosomal RNA gene, partial sequence blastn 50986 939 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. LITHOV
11437302 11437302 PRJNA849822_P_NODE_44009_length_228_cov_2.212903_g43835_i0 PRJNA849822 44009 228 2.212903 5.04541884 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 226 1.1299999999999997e-54   NTclustered gi|33946350|gb|AY294154.1| 242545 g43835 i0 86.408 84.8421052631579 206 28 90 0 18 223 39 244 Thecamoeba similis actin mRNA, complete cds blastn 19344 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
13592486 13592486 PRJNA849822_P_NODE_8291_length_526_cov_2.889625_g8119_i0 PRJNA849822 8291 526 2.889625 15.1994275 Vannella sp. LITHOV 1215650 Discosea other_Eukaryota 961 0   NTclustered gi|399764235|gb|JQ271746.1| 1215650 g8119 i0 99.62 99.5950570342205 526 2 100 0 1 526 587 62 Vannella sp. LITHOV 18S ribosomal RNA gene, partial sequence blastn 52387 961 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. LITHOV
14866718 14866718 PRJNA849822_P_NODE_42672_length_242_cov_1.846154_g42498_i0 PRJNA849822 42672 242 1.846154 4.46769268 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 122 1.6399999999999998e-23   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g42498 i0 88.889 40.9049586776859 99 11 41 0 141 239 121 219 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 9899 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16141471 16141471 PRJNA849822_P_NODE_42613_length_242_cov_4.153846_g42439_i0 PRJNA849822 42613 242 4.153846 10.05230732 Dermamoeba algensis 242549 Discosea other_Eukaryota 442 1.1099999999999995e-119   NTclustered gi|33946341|gb|AY294148.1| 242549 g42439 i0 99.588 60.3057851239669 243 0 100 1 1 242 153 395 Dermamoeba algensis small subunit ribosomal RNA gene, partial sequence blastn 14594 442 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Dermamoeba Dermamoeba algensis
18690037 18690037 PRJNA849822_P_NODE_40795_length_245_cov_0.895349_g40621_i0 PRJNA849822 40795 245 0.895349 2.19360505 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 263 9.38e-66   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g40621 i0 86.307 15.4734693877551 241 33 98 0 1 241 2634 2874 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 3791 263 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20359875 20359875 PRJNA849822_P_NODE_1896_length_1188_cov_7.806278_g1785_i0 PRJNA849822 1896 1188 7.806278 92.73858264 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 1312 0   NTclustered gi|33946350|gb|AY294154.1| 242545 g1785 i0 87.733 94.023569023569 1125 136 95 2 18 1141 39 1162 Thecamoeba similis actin mRNA, complete cds blastn 111700 1312 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
21240790 21240790 PRJNA849822_P_NODE_4457_length_754_cov_6.547724_g4293_i0 PRJNA849822 4457 754 6.547724 49.36983896 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 1.11e-89   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g4293 i0 79.31 61.3726790450928 522 85 68 18 47 557 13 522 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46275 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23790989 23790989 PRJNA849822_P_NODE_4839_length_717_cov_7.583851_g4675_i0 PRJNA849822 4839 717 7.583851 54.376211670000004 Vannella septentrionalis 197531 Discosea other_Eukaryota 1249 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g4675 i0 98.053 46.5048814504881 719 12 100 1 1 717 2436 3154 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 33344 1249 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25064707 25064707 PRJNA849822_P_NODE_17520_length_346_cov_2.688645_g17346_i0 PRJNA849822 17520 346 2.688645 9.3027117 Vannella sp. 1973054 Discosea other_Eukaryota 496 1.2599999999999999e-135   NTclustered gi|2169663314|gb|OL989990.1| 1973054 g17346 i0 92.754 93.1300578034682 345 18 99 7 6 346 1866 1525 Vannella sp. isolate P147 small subunit ribosomal RNA gene, partial sequence blastn 32223 496 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
25064930 25064930 PRJNA849822_P_NODE_43620_length_238_cov_5.163636_g43446_i0 PRJNA849822 43620 238 5.163636 12.28945368 Vannella septentrionalis 197531 Discosea other_Eukaryota 429 8.45e-116   NTclustered gi|300078499|gb|GU001161.1| 197531 g43446 i0 99.16 71.8613445378151 238 2 100 0 1 238 1874 1637 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17103 429 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;