RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA849822 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7216669 7216669 PRJNA849822_P_NODE_16306_length_359_cov_13.772727_g16132_i0 PRJNA849822 16306 359 13.772727 49.44408993 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 499 1.01e-136   NTclustered gi|238617602|gb|FJ973377.1| 188950 g16132 i0 91.758 101.451253481894 364 22 100 8 1 359 3033 2673 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 36421 499 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9766835 9766835 PRJNA849822_P_NODE_6828_length_590_cov_3.580271_g6659_i0 PRJNA849822 6828 590 3.580271 21.1235989 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 669 0   NTclustered gi|238617666|gb|FJ973412.1| 188950 g6659 i0 92.672 78.9169491525424 464 34 79 0 126 589 1 464 Bodomorpha minima strain ATCC 50339 alpha-tubulin (atub) gene, partial cds blastn 46561 669 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
11042150 11042150 PRJNA849822_P_NODE_12429_length_417_cov_14.186047_g12255_i0 PRJNA849822 12429 417 14.186047 59.15581599 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 285 3.6299999999999995e-72   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g12255 i0 81.283 35.726618705036 374 51 89 11 46 417 4021 3665 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 14898 285 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
13592445 13592445 PRJNA849822_P_NODE_44111_length_207_cov_13.582090_g43937_i0 PRJNA849822 44111 207 13.582090000000001 28.1149263 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 383 5.65e-102   NTclustered gi|197723521|gb|EF681900.2| 458884 g43937 i0 100 101.067632850242 207 0 100 0 1 207 938 732 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 20921 383 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
18689812 18689812 PRJNA849822_P_NODE_12095_length_423_cov_7.757143_g11921_i0 PRJNA849822 12095 423 7.757143 32.81271489 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 424 7.5e-114   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g11921 i0 86.923 52.0992907801418 390 35 92 9 36 423 4039 3664 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22038 424 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
22911139 22911139 PRJNA849822_P_NODE_33698_length_253_cov_0.866667_g33524_i0 PRJNA849822 33698 253 0.866667 2.19266751 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 189 1.6799999999999996e-43   NTclustered gi|219524918|gb|EU709281.1| 555790 g33524 i0 99.048 22.4624505928854 105 1 42 0 1 105 1726 1830 Bodomorpha sp. Panama115 18S ribosomal RNA gene, partial sequence blastn 5683 189 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. Panama115
24185076 24185076 PRJNA849822_P_NODE_36499_length_249_cov_4.397727_g36325_i0 PRJNA849822 36499 249 4.397727 10.95034023 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 459 1.1399999999999998e-124   NTclustered gi|225216798|gb|FJ176713.1| 458884 g36325 i0 100 101.285140562249 248 0 99 0 2 249 371 124 Bodomorpha sp. HFCC92 18S ribosomal RNA gene, partial sequence blastn 25220 459 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;