RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 4 ✖

bioproject 1

  • PRJNA849822 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4667146 4667146 PRJNA849822_P_NODE_37744_length_248_cov_0.891429_g37570_i0 PRJNA849822 37744 248 0.891429 2.21074392 Thermus sp. NEB1569 2918899 Bacteria Bacteria 359 1.18e-94   NTclustered gi|2199052145|gb|CP092445.1| 2918899 g37570 i0 92.742 1 248 18 100 0 1 248 575286 575533 Thermus sp. NEB1569 chromosome, complete genome blastn 248 359 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus sp. NEB1569
12317790 12317790 PRJNA849822_P_NODE_27930_length_276_cov_1.458128_g27756_i0 PRJNA849822 27930 276 1.458128 4.02443328 uncultured Dethiosulfovibrio sp. 185448 Bacteria Bacteria 54.7 0.007   NTclustered gi|2621705290|emb|OY763420.1| 185448 g27756 i0 100 0.105072463768116 29 0 11 0 205 233 2057251 2057223 MAG: uncultured Dethiosulfovibrio sp. isolate 94f88398-021e-4021-9552-bf231e535e7d genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Dethiosulfovibrio uncultured Dethiosulfovibrio sp.
13592363 13592363 PRJNA849822_P_NODE_33231_length_253_cov_1.672222_g33057_i0 PRJNA849822 33231 253 1.672222 4.23072166 Thermus thermophilus 274 Bacteria Bacteria 446 9.01e-121   NTclustered gi|383508497|gb|CP003252.1| 798128 g33057 i0 98.419 40.2134387351779 253 4 100 0 1 253 1432633 1432381 Thermus thermophilus JL-18, complete genome blastn 10174 446 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus
19965126 19965126 PRJNA849822_P_NODE_36556_length_249_cov_1.772727_g36382_i0 PRJNA849822 36556 249 1.772727 4.41409023 Thermus thermophilus 274 Bacteria Bacteria 449 6.840000000000001e-122   NTclustered gi|333965676|gb|CP002777.1| 762633 g36382 i0 99.197 36 249 2 100 0 1 249 571431 571183 Thermus thermophilus SG0.5JP17-16, complete genome blastn 8964 449 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus thermophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;