contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3389437 | 3389437 | PRJNA849822_P_NODE_41703_length_244_cov_0.894737_g41529_i0 | PRJNA849822 | 41703 | 244 | 0.894737 | 2.18315828 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 60.2 | 1.32e-4 | NTclustered | gi|2108175171|gb|CP070715.1| | 2026780 | g41529 | i0 | 81.69 | 0.549180327868853 | 71 | 13 | 29 | 0 | 174 | 244 | 75048 | 75118 | MAG: Planctomycetota bacterium isolate bin49 chromosome | blastn | 134 | 60.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 8491569 | 8491569 | PRJNA849822_P_NODE_40627_length_245_cov_0.906977_g40453_i0 | PRJNA849822 | 40627 | 245 | 0.906977 | 2.22209365 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|2874254019|emb|OY970344.1| | 412056 | g40453 | i0 | 98.776 | 97.3510204081633 | 245 | 3 | 100 | 0 | 1 | 245 | 1434662 | 1434906 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.c.3 genome assembly, chromosome: 1 | blastn | 23851 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9766772 | 9766772 | PRJNA849822_P_NODE_39348_length_246_cov_1.092486_g39174_i0 | PRJNA849822 | 39348 | 246 | 1.092486 | 2.68751556 | Roseimaritima ulvae | 980254 | Bacteria | Bacteria | 309 | 1.19e-79 | NTclustered | gi|1727550343|gb|CP042914.1| | 980254 | g39174 | i0 | 90.295 | 52.0772357723577 | 237 | 21 | 96 | 2 | 11 | 246 | 6158479 | 6158244 | Roseimaritima ulvae strain UC8 chromosome, complete genome | blastn | 12811 | 309 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Roseimaritima | Roseimaritima ulvae | |
| 13592299 | 13592299 | PRJNA849822_P_NODE_24971_length_290_cov_1.566820_g24797_i0 | PRJNA849822 | 24971 | 290 | 1.56682 | 4.543778 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 470 | 6.259999999999999e-128 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g24797 | i0 | 95.862 | 39.6068965517241 | 290 | 12 | 100 | 0 | 1 | 290 | 3557879 | 3557590 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 11486 | 470 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 18689920 | 18689920 | PRJNA849822_P_NODE_2495_length_1042_cov_3.850361_g2366_i0 | PRJNA849822 | 2495 | 1042 | 3.850361 | 40.12076162 | Singulisphaera acidiphila | 466153 | Bacteria | Bacteria | 69.4 | 1.05e-6 | NTclustered | gi|430012750|gb|CP003364.1| | 886293 | g2366 | i0 | 83.333 | 0.0748560460652591 | 78 | 10 | 7 | 1 | 848 | 925 | 2170801 | 2170727 | Singulisphaera acidiphila DSM 18658, complete genome | blastn | 78 | 69.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera acidiphila | |
| 19965122 | 19965122 | PRJNA849822_P_NODE_3616_length_851_cov_3.514139_g3459_i0 | PRJNA849822 | 3616 | 851 | 3.514139 | 29.90532289 | Bremerella volcania | 2527984 | Bacteria | Bacteria | 913 | 0 | NTclustered | gi|1712647354|gb|CP036289.1| | 2527984 | g3459 | i0 | 86.163 | 120.137485311398 | 860 | 101 | 99 | 12 | 6 | 851 | 2674752 | 2673897 | Bremerella volcania strain Pan97 chromosome, complete genome | blastn | 102237 | 913 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Bremerella | Bremerella volcania | |
| 25064964 | 25064964 | PRJNA849822_P_NODE_680_length_1832_cov_7.395679_g157_i1 | PRJNA849822 | 680 | 1832 | 7.395679 | 135.48883928 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 2566 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g157 | i1 | 92.044 | 98.1479257641921 | 1835 | 131 | 99 | 14 | 5 | 1832 | 3558031 | 3556205 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 179807 | 2566 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;