RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA849822" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA849822 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7216716 7216716 PRJNA849822_P_NODE_23106_length_301_cov_1.679825_g22932_i0 PRJNA849822 23106 301 1.679825 5.05627325 Trichomonas vaginalis 5722 Parabasalia other_Eukaryota 52.8 0.028   NTclustered gi|123487023|ref|XM_001324812.1| 412133 g22932 i0 100 0.186046511627907 28 0 9 0 45 72 39 66 Trichomonas vaginalis G3 uncharacterized protein (TVAGG3_0146900), partial mRNA blastn 56 52.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
11042238 11042238 PRJNA849822_P_NODE_23169_length_301_cov_1.109649_g22995_i0 PRJNA849822 23169 301 1.109649 3.34004349 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794935847|ref|XM_067876170.1| 2049356 g22995 i0 100 0.0963455149501661 29 0 10 0 267 295 2164 2136 Monocercomonoides exilis putative phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase (MONOS_5976), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16141406 16141406 PRJNA849822_P_NODE_34493_length_252_cov_0.871508_g34319_i0 PRJNA849822 34493 252 0.871508 2.19620016 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.006   NTclustered gi|2794977634|ref|XM_067866647.1| 2049356 g34319 i0 96.875 0.126984126984127 32 1 13 0 202 233 4237 4206 Monocercomonoides exilis putative Dual specificity phosphatase, catalytic domain (MONOS_139), partial mRNA blastn 32 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
18690117 18690117 PRJNA849822_P_NODE_875_length_1664_cov_2.956003_g801_i0 PRJNA849822 875 1664 2.956003 49.18788992 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 56.5 0.013   NTclustered gi|2806456372|ref|XM_068492112.1| 1144522 g801 i0 100 0.0372596153846154 30 0 2 0 137 166 3315 3344 Tritrichomonas foetus uncharacterized protein (TRFO_04802), partial mRNA blastn 62 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19965136 19965136 PRJNA849822_P_NODE_37976_length_248_cov_0.891429_g37802_i0 PRJNA849822 37976 248 0.891429 2.21074392 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.022   NTclustered gi|2794966944|ref|XM_067863829.1| 2049356 g37802 i0 100 0.564516129032258 28 0 11 0 221 248 6141 6114 Monocercomonoides exilis uncharacterized protein (MONOS_11309), partial mRNA blastn 140 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;