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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA849646" and tax_clade = "Sar"

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tax_phylum 4

tax_superkingdom 1

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA849646 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1233260 1233260 PRJNA849646_P_NODE_27021_length_255_cov_1.692308_g26903_i0 PRJNA849646 27021 255 1.692308 4.3153854 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 86.1 2.28e-12   NTclustered gi|2315199850|gb|OP604698.1| 271679 g26903 i0 86.842 23.3294117647059 76 10 30 0 1 76 2430 2505 Polykrikos kofoidii isolate Pk-FC1 large subunit ribosomal RNA gene, partial sequence blastn 5949 86.1 1 Eukaryota Sar     Dinophyceae Gymnodiniales Gymnodiniaceae Polykrikos Polykrikos kofoidii
2113882 2113882 PRJNA849646_P_NODE_8642_length_290_cov_4.041475_g8524_i0 PRJNA849646 8642 290 4.041475 11.7202775 Phytophthora angustata 3073753 SAR_Eukaryotes SAR_Eukaryotes 180 1.18e-40   NTclustered gi|2689410834|gb|OR588318.1| 3073753 g8524 i0 78.007 8.15862068965517 291 60 99 4 2 290 37 325 Phytophthora angustata isolate NI121 60S ribosomal protein L10 (rpl10) gene, partial cds blastn 2366 180 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora angustata
5061267 5061267 PRJNA849646_P_NODE_18304_length_271_cov_4.429293_g18186_i0 PRJNA849646 18304 271 4.429293 12.00338403 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 449 7.540000000000001e-122   NTclustered gi|174166|gb|M98367.1|CLPRRLSA 5980 g18186 i0 96.31 98.8819188191882 271 9 100 1 1 271 340 71 Colpoda inflata large subunit ribosomal RNA, 5' end blastn 26797 451 0.995565410199557 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda inflata
5941537 5941537 PRJNA849646_P_NODE_36445_length_243_cov_1.811765_g36327_i0 PRJNA849646 36445 243 1.811765 4.40258895 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 80.5 1e-10   NTclustered gi|915141676|ref|XM_013482159.1| 5804 g36327 i0 84.81 30.5308641975309 79 12 33 0 1 79 4782 4860 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 7419 80.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
7216237 7216237 PRJNA849646_P_NODE_1706_length_405_cov_3.385542_g1589_i0 PRJNA849646 1706 405 3.385542 13.7114451 Spumella sp. HFCC100 459029 SAR_Eukaryotes SAR_Eukaryotes 276 2.12e-69   NTclustered gi|161015703|gb|EF681937.1| 459029 g1589 i0 85.556 56.8913580246914 270 31 66 6 1 268 697 434 Spumella sp. HFCC100 28S ribosomal RNA gene, partial sequence blastn 23041 276 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp. HFCC100
7216436 7216436 PRJNA849646_P_NODE_33386_length_246_cov_4.670520_g33268_i0 PRJNA849646 33386 246 4.67052 11.4894792 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 350 7.04e-92   NTclustered gi|220966760|gb|FJ545743.1| 94289 g33268 i0 92.276 81.5447154471545 246 19 100 0 1 246 5687 5932 Sterkiella histriomuscorum 17S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; macronuclear blastn 20060 350 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
9766356 9766356 PRJNA849646_P_NODE_35408_length_244_cov_2.304094_g35290_i0 PRJNA849646 35408 244 2.304094 5.62198936 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 429 8.699999999999998e-116   NTclustered gi|2651357791|gb|PP174306.1| 41631 g35290 i0 98.361 81.5040983606557 244 4 100 0 1 244 3604 3361 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19887 429 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
11041734 11041734 PRJNA849646_P_NODE_13389_length_281_cov_1.480769_g13271_i0 PRJNA849646 13389 281 1.480769 4.16096089 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 327 3.84e-85   NTclustered gi|238617605|gb|FJ973380.1| 45107 g13271 i0 87.762 46.0106761565836 286 27 99 6 2 281 1595 1878 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 12929 327 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
13986980 13986980 PRJNA849646_P_NODE_12171_length_283_cov_2.657143_g12053_i0 PRJNA849646 12171 283 2.657143 7.51971469 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 518 2.14e-142   NTclustered gi|14495562|gb|L21708.2|PFA34K 5821 g12053 i0 99.647 99.9964664310954 283 1 100 0 1 283 940 1222 Plasmodium berghei p23-like protein mRNA, partial cds blastn 28299 523 0.990439770554493 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
14866236 14866236 PRJNA849646_P_NODE_2972_length_332_cov_3.644788_g2854_i0 PRJNA849646 2972 332 3.644788 12.10069616 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 318 2.79e-82   NTclustered gi|166044589|emb|CU367498.1| 100861 g2854 i0 100 79.0632530120482 172 0 61 0 1 172 177 348 Aphanomyces euteiches cDNA blastn 26249 318 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
16535896 16535896 PRJNA849646_P_NODE_23753_length_261_cov_2.117021_g23635_i0 PRJNA849646 23753 261 2.117021 5.52542481 root 1 Root_unresolved Root_unresolved 477 3.3099999999999986e-130   NTclustered gi|166046482|emb|CU367599.1| 100861 g23635 i0 99.617 100 261 1 100 0 1 261 153 413 Aphanomyces euteiches cDNA blastn 26100 477 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
19964580 19964580 PRJNA849646_P_NODE_19956_length_268_cov_2.800000_g19838_i0 PRJNA849646 19956 268 2.8 7.504 uncultured alveolate 175274 SAR_Eukaryotes SAR_Eukaryotes 490 4.39e-134   NTclustered gi|157688355|gb|EU162620.1| 175274 g19838 i0 99.627 99.9962686567164 268 1 100 0 1 268 23 290 Uncultured alveolate clone PAC10SP2005 18S ribosomal RNA gene, partial sequence blastn 26799 490 1 Eukaryota Sar             uncultured alveolate
19964871 19964871 PRJNA849646_P_NODE_676_length_596_cov_2.879541_g561_i0 PRJNA849646 676 596 2.879541 17.16206436 Spumella sp. 1955568 SAR_Eukaryotes SAR_Eukaryotes 628 2.1399999999999998e-175   NTclustered gi|2055919756|gb|MZ420314.1| 1955568 g561 i0 86.093 101.015100671141 604 61 100 19 1 596 1398 1986 Spumella sp. strain Woeam021018A5 large subunit ribosomal RNA gene, partial sequence blastn 60205 628 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Spumella Spumella sp.
21240147 21240147 PRJNA849646_P_NODE_16957_length_274_cov_2.039801_g16839_i0 PRJNA849646 16957 274 2.039801 5.58905474 Cyclotrichium cyclokaryon 696133 SAR_Eukaryotes SAR_Eukaryotes 350 7.97e-92   NTclustered gi|375305436|gb|JF975396.1| 696133 g16839 i0 93.939 55.6277372262774 231 14 84 0 44 274 1 231 Cyclotrichium cyclokaryon isolate LWW07111501 28S ribosomal RNA gene, partial sequence blastn 15242 350 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Didiniidae Cyclotrichium Cyclotrichium cyclokaryon
22514863 22514863 PRJNA849646_P_NODE_16998_length_274_cov_1.825871_g16880_i0 PRJNA849646 16998 274 1.825871 5.00288654 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|676388378|ref|XM_009039220.1| 44056 g16880 i0 94.286 0.22992700729927 35 2 13 0 91 125 1520 1486 Aureococcus anophagefferens hypothetical protein partial mRNA blastn 63 54.7 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
23790672 23790672 PRJNA849646_P_NODE_5659_length_310_cov_2.877637_g5541_i0 PRJNA849646 5659 310 2.877637 8.9206747 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.029   NTclustered gi|749159684|ref|XM_011133169.1| 110365 g5541 i0 100 0.0903225806451613 28 0 9 0 117 144 439 466 Gregarina niphandrodes hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
25064438 25064438 PRJNA849646_P_NODE_320_length_939_cov_11.543880_g223_i0 PRJNA849646 320 939 11.54388 108.3970332 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 1005 0   NTclustered gi|325194231|emb|FR825088.1| 890382 g223 i0 95.016 7.71884984025559 642 28 82 3 299 939 935 1573 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 7248 1005 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;