RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA849646" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA849646 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3388798 3388798 PRJNA849646_P_NODE_15923_length_276_cov_1.517241_g15805_i0 PRJNA849646 15923 276 1.517241 4.18758516 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 137 6.81e-28   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g15805 i0 94.444 28.5652173913043 90 4 33 1 177 266 330098 330010 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 7884 137 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
13592151 13592151 PRJNA849646_P_NODE_9911_length_288_cov_1.432558_g9793_i0 PRJNA849646 9911 288 1.432558 4.12576704 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 460 3.74e-125   NTclustered gi|2874253967|emb|OY970292.1| 2052151 g9793 i0 96.113 73.1180555555556 283 10 98 1 1 282 718450 718732 MAG: Candidatus Levybacteria bacterium isolate MFD01916.bin.c.8 genome assembly, chromosome: 1 blastn 21058 460 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
17416323 17416323 PRJNA849646_P_NODE_15574_length_277_cov_1.294118_g15456_i0 PRJNA849646 15574 277 1.294118 3.58470686 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 418 2.1799999999999996e-112   NTclustered gi|1842055115|gb|CP040000.1| 713059 g15456 i0 93.863 28.9819494584838 277 17 100 0 1 277 304099 303823 Candidatus Saccharibacteria bacterium oral taxon 488 strain FS03P chromosome, complete genome blastn 8028 418 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
25064235 25064235 PRJNA849646_P_NODE_16180_length_275_cov_4.683168_g16062_i0 PRJNA849646 16180 275 4.683168 12.878712 Candidatus Nanosynbacter sp. HMT-348_TM7c-JB 2933970 Bacteria Bacteria 486 5.8499999999999985e-133   NTclustered gi|2179907571|gb|CP090820.1| 2933970 g16062 i0 98.545 1 275 4 100 0 1 275 279640 279914 MAG: Candidatus Nanosynbacter sp. HMT-348_TM7c-JB isolate JCVI_32_bin.19 chromosome, complete genome blastn 275 486 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-348_TM7c-JB

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;