RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA849172" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA849172 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2110852 2110852 PRJNA849172_P_NODE_147522_length_199_cov_6.380952_g147162_i0 PRJNA849172 147522 199 6.380952 12.69809448 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 163 7.65e-36   NTclustered gi|2874253878|emb|OY969933.1| 3107663 g147162 i0 82.199 21.9899497487437 191 32 95 2 4 193 1058512 1058323 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD05502.bin.c.2 genome assembly, chromosome: 1 blastn 4376 163 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
7213130 7213130 PRJNA849172_P_NODE_1326_length_1823_cov_6685.570857_g1220_i0 PRJNA849172 1326 1823 6685.570857 121877.95672311 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 1328 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g1220 i0 80.903 523.890839275919 1749 278 94 49 81 1802 5031205 5032924 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 955053 1328 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
17413588 17413588 PRJNA849172_P_NODE_1474_length_1745_cov_3553.427632_g1220_i1 PRJNA849172 1474 1745 3553.427632 62007.3121784 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 1458 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g1220 i1 82.576 530.177077363897 1716 240 97 53 37 1724 5031240 5032924 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 925159 1458 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
21240019 21240019 PRJNA849172_P_NODE_9857_length_685_cov_12.501634_g9508_i0 PRJNA849172 9857 685 12.501634 85.6361929 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 972 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g9508 i0 92.857 488.261313868613 672 44 98 4 16 685 5032924 5032255 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 334459 972 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;