contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA849172" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 836760 | 836760 | PRJNA849172_P_NODE_58401_length_283_cov_2.038095_g58041_i0 | PRJNA849172 | 58401 | 283 | 2.038095 | 5.76780885 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 512 | 9.97e-141 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g58041 | i0 | 99.293 | 1 | 283 | 2 | 100 | 0 | 1 | 283 | 2649871 | 2649589 | Luteolibacter sp. SL250 chromosome | blastn | 283 | 512 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 837489 | 837489 | PRJNA849172_P_NODE_82281_length_257_cov_7.271739_g81921_i0 | PRJNA849172 | 82281 | 257 | 7.271739 | 18.68836923 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 254 | 5.970000000000001e-63 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g81921 | i0 | 86.325 | 0.910505836575875 | 234 | 31 | 91 | 1 | 25 | 257 | 2414029 | 2413796 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 234 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 3386214 | 3386214 | PRJNA849172_P_NODE_15763_length_525_cov_9.314159_g15404_i0 | PRJNA849172 | 15763 | 525 | 9.314159 | 48.89933475 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 942 | 0 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g15404 | i0 | 99.049 | 4.27809523809524 | 526 | 4 | 100 | 1 | 1 | 525 | 3395916 | 3395391 | Luteolibacter sp. SL250 chromosome | blastn | 2246 | 942 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 4663651 | 4663651 | PRJNA849172_P_NODE_14084_length_560_cov_2.726899_g13725_i0 | PRJNA849172 | 14084 | 560 | 2.726899 | 15.2706344 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 983 | 0 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g13725 | i0 | 98.393 | 253.348214285714 | 560 | 8 | 100 | 1 | 1 | 560 | 1262 | 704 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 141875 | 983 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 5938213 | 5938213 | PRJNA849172_P_NODE_133545_length_216_cov_4.440559_g133185_i0 | PRJNA849172 | 133545 | 216 | 4.440559 | 9.59160744 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 206 | 1.3799999999999998e-48 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g133185 | i0 | 83.871 | 97.212962962963 | 217 | 33 | 100 | 2 | 1 | 216 | 2448294 | 2448079 | Luteolibacter sp. SL250 chromosome | blastn | 20998 | 206 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 7215524 | 7215524 | PRJNA849172_P_NODE_79226_length_260_cov_3.866310_g78866_i0 | PRJNA849172 | 79226 | 260 | 3.86631 | 10.052406 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 206 | 1.7199999999999998e-48 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g78866 | i0 | 82.231 | 1.83076923076923 | 242 | 39 | 92 | 4 | 1 | 240 | 3601896 | 3601657 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 476 | 206 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 8488520 | 8488520 | PRJNA849172_P_NODE_2227_length_1469_cov_18.004298_g2062_i0 | PRJNA849172 | 2227 | 1469 | 18.004298 | 264.48313762 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1570 | 0 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g2062 | i0 | 87.527 | 196.74540503744 | 1371 | 155 | 93 | 15 | 109 | 1469 | 2364709 | 2366073 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 289019 | 1570 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 9762820 | 9762820 | PRJNA849172_P_NODE_125208_length_228_cov_2.012903_g124848_i0 | PRJNA849172 | 125208 | 228 | 2.012903 | 4.5894188400000004 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 405 | 1.35e-108 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g124848 | i0 | 98.684 | 1 | 228 | 3 | 100 | 0 | 1 | 228 | 1048490 | 1048717 | Luteolibacter sp. SL250 chromosome | blastn | 228 | 405 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 11038308 | 11038308 | PRJNA849172_P_NODE_119309_length_232_cov_4.691824_g118949_i0 | PRJNA849172 | 119309 | 232 | 4.691824 | 10.88503168 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 313 | 8.62e-81 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g118949 | i0 | 90.948 | 1 | 232 | 21 | 100 | 0 | 1 | 232 | 2930749 | 2930980 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 232 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 11039726 | 11039726 | PRJNA849172_P_NODE_33309_length_356_cov_1.653710_g32950_i0 | PRJNA849172 | 33309 | 356 | 1.65371 | 5.8872076 | Methylacidiphilum caldifontis | 2795386 | Bacteria | Bacteria | 318 | 3.01e-82 | NTclustered | gi|1999107441|gb|CP065957.1| | 2795386 | g32950 | i0 | 86.926 | 107.707865168539 | 283 | 37 | 79 | 0 | 72 | 354 | 841089 | 840807 | Methylacidiphilum caldifontis strain IT6 chromosome, complete genome | blastn | 38344 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Methylacidiphilaceae | Methylacidiphilum (ex Ratnadevi et al. 2023) | Methylacidiphilum caldifontis | |
| 12316143 | 12316143 | PRJNA849172_P_NODE_65290_length_275_cov_1.212871_g64930_i0 | PRJNA849172 | 65290 | 275 | 1.212871 | 3.33539525 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 497 | 2.7e-136 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g64930 | i0 | 99.273 | 5.52 | 275 | 2 | 100 | 0 | 1 | 275 | 4253738 | 4253464 | Luteolibacter sp. SL250 chromosome | blastn | 1518 | 497 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 12711909 | 12711909 | PRJNA849172_P_NODE_2190_length_1480_cov_28.129353_g1864_i1 | PRJNA849172 | 2190 | 1480 | 28.129353 | 416.3144244 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 1960 | 0 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g1864 | i1 | 91.649 | 154.700675675676 | 1425 | 105 | 96 | 12 | 1 | 1417 | 913 | 2331 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 228957 | 1960 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 13587807 | 13587807 | PRJNA849172_P_NODE_102871_length_245_cov_0.895349_g102511_i0 | PRJNA849172 | 102871 | 245 | 0.895349 | 2.19360505 | Coraliomargarita algicola | 3092156 | Bacteria | Bacteria | 62.1 | 3.67e-5 | NTclustered | gi|2623481368|gb|CP138858.1| | 3092156 | g102511 | i0 | 100 | 0.13469387755102 | 33 | 0 | 13 | 0 | 1 | 33 | 4398708 | 4398676 | Coraliomargarita algicola strain J2-16 chromosome, complete genome | blastn | 33 | 62.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Puniceicoccales | Coraliomargaritaceae | Coraliomargarita | Coraliomargarita algicola | |
| 13588298 | 13588298 | PRJNA849172_P_NODE_119531_length_232_cov_3.729560_g119171_i0 | PRJNA849172 | 119531 | 232 | 3.72956 | 8.6525792 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 198 | 2.52e-46 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g119171 | i0 | 84.804 | 51.5 | 204 | 24 | 87 | 4 | 29 | 230 | 3433910 | 3433712 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 11948 | 198 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 13591383 | 13591383 | PRJNA849172_P_NODE_88231_length_253_cov_0.866667_g87871_i0 | PRJNA849172 | 88231 | 253 | 0.866667 | 2.19266751 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 161 | 3.6599999999999995e-35 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g87871 | i0 | 85.093 | 0.636363636363636 | 161 | 21 | 63 | 3 | 13 | 172 | 658092 | 657934 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 161 | 161 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 13591665 | 13591665 | PRJNA849172_P_NODE_98211_length_247_cov_1.793103_g97851_i0 | PRJNA849172 | 98211 | 247 | 1.793103 | 4.42896441 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 193 | 1.26e-44 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g97851 | i0 | 87.5 | 0.680161943319838 | 168 | 19 | 68 | 2 | 78 | 245 | 3152616 | 3152781 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 168 | 193 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 17413166 | 17413166 | PRJNA849172_P_NODE_132474_length_217_cov_6.652778_g132114_i0 | PRJNA849172 | 132474 | 217 | 6.652778 | 14.43652826 | Actomonas aquatica | 2866162 | Bacteria | Bacteria | 198 | 2.3299999999999997e-46 | NTclustered | gi|2647674565|gb|CP139781.1| | 2866162 | g132114 | i0 | 85.638 | 82.9953917050691 | 188 | 27 | 87 | 0 | 14 | 201 | 1594631 | 1594818 | Actomonas aquatica strain WL0086 chromosome, complete genome | blastn | 18010 | 198 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Actomonas | Actomonas aquatica | |
| 18685478 | 18685478 | PRJNA849172_P_NODE_104055_length_244_cov_1.824561_g103695_i0 | PRJNA849172 | 104055 | 244 | 1.824561 | 4.45192884 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 416 | 6.769999999999999e-112 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g103695 | i0 | 97.531 | 5.32786885245902 | 243 | 6 | 99 | 0 | 1 | 243 | 170586 | 170828 | Luteolibacter sp. SL250 chromosome | blastn | 1300 | 416 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 19963250 | 19963250 | PRJNA849172_P_NODE_59376_length_282_cov_1.401914_g59016_i0 | PRJNA849172 | 59376 | 282 | 1.401914 | 3.95339748 | Nibricoccus aquaticus | 2576891 | Bacteria | Bacteria | 95.3 | 4.26e-15 | NTclustered | gi|1243404978|gb|CP023344.1| | 2576891 | g59016 | i0 | 86.364 | 0.312056737588652 | 88 | 10 | 31 | 1 | 195 | 282 | 4519810 | 4519895 | Nibricoccus aquaticus strain HZ-65 chromosome, complete genome | blastn | 88 | 95.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Nibricoccus | Nibricoccus aquaticus | |
| 19964124 | 19964124 | PRJNA849172_P_NODE_88776_length_252_cov_3.156425_g88416_i0 | PRJNA849172 | 88776 | 252 | 3.156425 | 7.954191 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 272 | 1.6099999999999999e-68 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g88416 | i0 | 86.111 | 7.83333333333333 | 252 | 35 | 100 | 0 | 1 | 252 | 5821389 | 5821138 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 1974 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 20358704 | 20358704 | PRJNA849172_P_NODE_2016_length_1540_cov_33.134288_g1864_i0 | PRJNA849172 | 2016 | 1540 | 33.134288 | 510.2680352 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 2036 | 0 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g1864 | i0 | 92.469 | 126.595454545455 | 1434 | 92 | 93 | 14 | 1 | 1427 | 913 | 2337 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 194957 | 2047 | 0.994626282364436 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 21237510 | 21237510 | PRJNA849172_P_NODE_15017_length_540_cov_2.601713_g14658_i0 | PRJNA849172 | 15017 | 540 | 2.601713 | 14.0492502 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 854 | 0 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g14658 | i0 | 95.833 | 154.672222222222 | 528 | 22 | 98 | 0 | 1 | 528 | 3557083 | 3557610 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 83523 | 854 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 21238767 | 21238767 | PRJNA849172_P_NODE_55437_length_287_cov_1.883178_g55077_i0 | PRJNA849172 | 55437 | 287 | 1.883178 | 5.40472086 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 514 | 2.82e-141 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g55077 | i0 | 98.955 | 1.11498257839721 | 287 | 3 | 100 | 0 | 1 | 287 | 1700094 | 1699808 | Luteolibacter sp. SL250 chromosome | blastn | 320 | 514 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 21239473 | 21239473 | PRJNA849172_P_NODE_79417_length_260_cov_2.919786_g79057_i0 | PRJNA849172 | 79417 | 260 | 2.919786 | 7.5914436 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 130 | 1.06e-25 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g79057 | i0 | 96.25 | 51.2423076923077 | 80 | 2 | 31 | 1 | 25 | 104 | 673659 | 673581 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 13323 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23786602 | 23786602 | PRJNA849172_P_NODE_108399_length_242_cov_1.414201_g108039_i0 | PRJNA849172 | 108399 | 242 | 1.414201 | 3.42236642 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 254 | 5.57e-63 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g108039 | i0 | 89.552 | 2.00413223140496 | 201 | 19 | 83 | 2 | 1 | 200 | 1757582 | 1757781 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 485 | 254 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;