contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA849172" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 834604 | 834604 | PRJNA849172_P_NODE_119661_length_232_cov_3.421384_g119301_i0 | PRJNA849172 | 119661 | 232 | 3.421384 | 7.93761088 | uncultured Gemmatimonadetes bacterium Rifle_16ft_4_minimus_37772 | 1665097 | Bacteria | Bacteria | 246 | 8.869999999999999e-61 | NTclustered | gi|874575674|gb|KT007003.1| | 1665097 | g119301 | i0 | 85.897 | 9.86637931034483 | 234 | 29 | 100 | 4 | 1 | 232 | 43619 | 43850 | Uncultured Gemmatimonadetes bacterium Rifle_16ft_4_minimus_37772 genomic sequence | blastn | 2289 | 246 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | uncultured Gemmatimonadetes bacterium Rifle_16ft_4_minimus_37772 | |||||
| 2110868 | 2110868 | PRJNA849172_P_NODE_148002_length_199_cov_4.698413_g147642_i0 | PRJNA849172 | 148002 | 199 | 4.698413 | 9.34984187 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 185 | 1.6299999999999994e-42 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g147642 | i0 | 92.366 | 227.386934673367 | 131 | 8 | 65 | 2 | 64 | 193 | 1904483 | 1904612 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 45250 | 185 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 3386040 | 3386040 | PRJNA849172_P_NODE_144403_length_202_cov_13.465116_g144043_i0 | PRJNA849172 | 144403 | 202 | 13.465116 | 27.19953432 | Pseudogemmatithrix spongiicola | 3062599 | Bacteria | Bacteria | 291 | 3.42e-74 | NTclustered | gi|2557479348|gb|CP130613.1| | 3062599 | g144043 | i0 | 92.611 | 128.39603960396 | 203 | 14 | 100 | 1 | 1 | 202 | 1555002 | 1554800 | Pseudogemmatithrix spongiicola strain 318 chromosome, complete genome | blastn | 25936 | 291 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Pseudogemmatithrix | Pseudogemmatithrix spongiicola | |
| 3387454 | 3387454 | PRJNA849172_P_NODE_56843_length_285_cov_2.202830_g56483_i0 | PRJNA849172 | 56843 | 285 | 2.20283 | 6.2780655 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 243 | 1.4600000000000004e-59 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g56483 | i0 | 84.19 | 99.8140350877193 | 253 | 36 | 97 | 4 | 23 | 273 | 5295804 | 5296054 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 28447 | 243 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 3388608 | 3388608 | PRJNA849172_P_NODE_96203_length_248_cov_2.217143_g95843_i0 | PRJNA849172 | 96203 | 248 | 2.217143 | 5.49851464 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 183 | 7.62e-42 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g95843 | i0 | 83.168 | 117.116935483871 | 202 | 32 | 100 | 2 | 48 | 248 | 338770 | 338570 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 29045 | 183 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 9762490 | 9762490 | PRJNA849172_P_NODE_114148_length_237_cov_2.750000_g113788_i0 | PRJNA849172 | 114148 | 237 | 2.75 | 6.5175 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 255 | 1.51e-63 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g113788 | i0 | 87.5 | 4.66666666666667 | 224 | 25 | 94 | 3 | 13 | 235 | 2299102 | 2299323 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 1106 | 255 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12315914 | 12315914 | PRJNA849172_P_NODE_5730_length_920_cov_14.962220_g5438_i0 | PRJNA849172 | 5730 | 920 | 14.96222 | 137.652424 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g5438 | i0 | 82.392 | 85.7239130434783 | 903 | 148 | 97 | 9 | 6 | 901 | 5001330 | 5002228 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 78866 | 776 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12711721 | 12711721 | PRJNA849172_P_NODE_139250_length_208_cov_6.733333_g138890_i0 | PRJNA849172 | 139250 | 208 | 6.733333 | 14.00533264 | FCB group | 1783270 | Bacteria | Bacteria | 183 | 6.19e-42 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g138890 | i0 | 86.047 | 68.9086538461538 | 172 | 23 | 83 | 1 | 24 | 195 | 3220980 | 3220810 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 14333 | 183 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 13587888 | 13587888 | PRJNA849172_P_NODE_105931_length_243_cov_2.205882_g105571_i0 | PRJNA849172 | 105931 | 243 | 2.205882 | 5.36029326 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 180 | 9.63e-41 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g105571 | i0 | 85.799 | 21.2674897119342 | 169 | 24 | 70 | 0 | 75 | 243 | 6852778 | 6852610 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 5168 | 180 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 14862535 | 14862535 | PRJNA849172_P_NODE_119132_length_232_cov_6.138365_g118772_i0 | PRJNA849172 | 119132 | 232 | 6.138365 | 14.2410068 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 178 | 3.2799999999999993e-40 | NTclustered | gi|575461033|gb|CP007129.1| | 861299 | g118772 | i0 | 84.324 | 0.918103448275862 | 185 | 25 | 79 | 4 | 12 | 194 | 272921 | 272739 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence | blastn | 213 | 178 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 14863961 | 14863961 | PRJNA849172_P_NODE_32872_length_358_cov_3.936842_g32513_i0 | PRJNA849172 | 32872 | 358 | 3.936842 | 14.09389436 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 243 | 1.8700000000000001e-59 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g32513 | i0 | 79.282 | 1.29608938547486 | 362 | 64 | 100 | 7 | 1 | 358 | 8364923 | 8364569 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 464 | 243 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17412779 | 17412779 | PRJNA849172_P_NODE_118574_length_233_cov_2.925000_g118214_i0 | PRJNA849172 | 118574 | 233 | 2.925 | 6.81525 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 243 | 1.1500000000000001e-59 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g118214 | i0 | 86.222 | 1.93562231759657 | 225 | 30 | 97 | 1 | 2 | 226 | 5141187 | 5140964 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 451 | 243 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17413065 | 17413065 | PRJNA849172_P_NODE_128554_length_223_cov_33.266667_g128194_i0 | PRJNA849172 | 128554 | 223 | 33.266667 | 74.18466741 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 272 | 1.3999999999999996e-68 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g128194 | i0 | 88.938 | 224.618834080717 | 226 | 18 | 100 | 7 | 1 | 223 | 1904761 | 1904540 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 50090 | 272 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17413344 | 17413344 | PRJNA849172_P_NODE_138794_length_209_cov_4.588235_g138434_i0 | PRJNA849172 | 138794 | 209 | 4.588235 | 9.58941115 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 202 | 1.7199999999999998e-47 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g138434 | i0 | 84.286 | 2.35406698564593 | 210 | 30 | 100 | 3 | 1 | 209 | 4115667 | 4115460 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 492 | 202 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17415724 | 17415724 | PRJNA849172_P_NODE_81934_length_258_cov_1.686486_g81574_i0 | PRJNA849172 | 81934 | 258 | 1.686486 | 4.35113388 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 259 | 1.29e-64 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g81574 | i0 | 85.214 | 1.95736434108527 | 257 | 32 | 99 | 6 | 2 | 255 | 3724349 | 3724602 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 505 | 259 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 19960567 | 19960567 | PRJNA849172_P_NODE_102136_length_245_cov_1.802326_g101776_i0 | PRJNA849172 | 102136 | 245 | 1.802326 | 4.4156987 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 287 | 5.57e-73 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g101776 | i0 | 92.157 | 73.9918367346939 | 204 | 14 | 83 | 2 | 43 | 245 | 3167220 | 3167018 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 18128 | 287 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 19960667 | 19960667 | PRJNA849172_P_NODE_106056_length_243_cov_1.835294_g105696_i0 | PRJNA849172 | 106056 | 243 | 1.835294 | 4.45976442 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 191 | 4.45e-44 | NTclustered | gi|2874254163|emb|OY970395.1| | 412054 | g105696 | i0 | 81.172 | 5.57201646090535 | 239 | 43 | 98 | 2 | 2 | 239 | 3906622 | 3906385 | MAG: uncultured Gemmatimonadales bacterium isolate MFD05684.bin.c.1 genome assembly, chromosome: 1 | blastn | 1354 | 191 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 19963428 | 19963428 | PRJNA849172_P_NODE_65276_length_275_cov_1.282178_g64916_i0 | PRJNA849172 | 65276 | 275 | 1.282178 | 3.5259895 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 217 | 8.47e-52 | NTclustered | gi|2893358411|emb|OZ220702.1| | 2910168 | g64916 | i0 | 81.55 | 2.85090909090909 | 271 | 43 | 97 | 7 | 8 | 275 | 2161136 | 2160870 | MAG: Longimicrobiales bacterium isolate 5c038fdb-8e0b-4cbd-9550-43be1afc0bbf genome assembly, chromosome: 1 | blastn | 784 | 217 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 21238467 | 21238467 | PRJNA849172_P_NODE_45617_length_309_cov_2.915254_g45257_i0 | PRJNA849172 | 45617 | 309 | 2.915254 | 9.00813486 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 213 | 1.25e-50 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g45257 | i0 | 78.571 | 4.09708737864078 | 308 | 57 | 99 | 6 | 4 | 309 | 3848704 | 3848404 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 1266 | 213 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 21239511 | 21239511 | PRJNA849172_P_NODE_80797_length_259_cov_1.768817_g80437_i0 | PRJNA849172 | 80797 | 259 | 1.768817 | 4.58123603 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 124 | 4.9299999999999996e-24 | NTclustered | gi|575462059|gb|CP007130.1| | 861299 | g80437 | i0 | 85.246 | 0.471042471042471 | 122 | 16 | 47 | 2 | 129 | 249 | 547535 | 547415 | Gemmatirosa kalamazoonesis strain KBS708 plasmid 2, complete sequence | blastn | 122 | 124 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 25060420 | 25060420 | PRJNA849172_P_NODE_10520_length_660_cov_6.991482_g10168_i0 | PRJNA849172 | 10520 | 660 | 6.991482 | 46.1437812 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 411 | 9.409999999999998e-110 | NTclustered | gi|2874253728|emb|OY969570.1| | 412054 | g10168 | i0 | 78.228 | 3.89545454545455 | 666 | 127 | 99 | 15 | 3 | 660 | 2877105 | 2877760 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02840.bin.c.1 genome assembly, chromosome: 1 | blastn | 2571 | 411 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 25062751 | 25062751 | PRJNA849172_P_NODE_50300_length_295_cov_5.563063_g49940_i0 | PRJNA849172 | 50300 | 295 | 5.563063 | 16.41103585 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 462 | 1.07e-125 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g49940 | i0 | 97.77 | 119.257627118644 | 269 | 5 | 91 | 1 | 1 | 268 | 341131 | 341399 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 35181 | 462 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;