RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA849172" and tax_phylum = "Euglenozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA849172 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11037847 11037847 PRJNA849172_P_NODE_102989_length_244_cov_9.707602_g102629_i0 PRJNA849172 102989 244 9.707602 23.68654888 Keelungia nitschei 2529305 Euglenozoa other_Eukaryota 200 7.4299999999999985e-47   NTclustered gi|1581142783|gb|MK567808.1| 2529305 g102629 i0 81.893 101.577868852459 243 38 99 5 1 242 1606 1369 Keelungia nitschei strain HFCC166 large subunit ribosomal RNA gene, partial sequence blastn 24785 200 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Heteronematidae Keelungia Keelungia nitschei
11040235 11040235 PRJNA849172_P_NODE_49709_length_297_cov_3.026786_g49349_i0 PRJNA849172 49709 297 3.026786 8.98955442 Bodo saltans 75058 Euglenozoa other_Eukaryota 265 3.2599999999999997e-66   NTclustered gi|7012640|gb|AF177240.1|AF177240 75058 g49349 i0 85.714 2.2020202020202 252 34 85 2 39 289 282 532 Bodo saltans clone pBME59 mitocondrial minicircle DNA blastn 654 265 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;