RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA849172" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA849172 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
837636 837636 PRJNA849172_P_NODE_86921_length_253_cov_6.100000_g86561_i0 PRJNA849172 86921 253 6.1 15.433 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 438 1.5099999999999996e-118   NTclustered gi|2874253811|emb|OY969795.1| 464461 g86561 i0 98.016 159.415019762846 252 5 99 0 2 253 653094 652843 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 40332 438 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
11435739 11435739 PRJNA849172_P_NODE_11949_length_613_cov_10.490741_g11594_i0 PRJNA849172 11949 613 10.490741 64.30824233 Neochlamydia 112987 Bacteria Bacteria 734 0   NTclustered gi|194594624|gb|EU662269.1| 112235 g11594 i0 88.368 188.761827079935 619 61 100 11 1 613 424 1037 Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence blastn 115711 734 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Neochlamydia Neochlamydia hartmannellae
16139168 16139168 PRJNA849172_P_NODE_4553_length_1039_cov_16.933747_g4285_i0 PRJNA849172 4553 1039 16.933747 175.94163133 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 1441 0   NTclustered gi|2874253811|emb|OY969795.1| 464461 g4285 i0 91.755 177.108758421559 1043 76 100 7 1 1039 654780 653744 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 184016 1441 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
21237983 21237983 PRJNA849172_P_NODE_30017_length_374_cov_7.109635_g29658_i0 PRJNA849172 30017 374 7.109635 26.5900349 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 514 3.78e-141   NTclustered gi|2874253811|emb|OY969795.1| 464461 g29658 i0 91.489 116.120320855615 376 29 99 3 1 373 654250 653875 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 43429 514 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;