RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA849172" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 4 ✖

bioproject 1

  • PRJNA849172 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11038279 11038279 PRJNA849172_P_NODE_118229_length_233_cov_4.287500_g117869_i0 PRJNA849172 118229 233 4.2875 9.989875 Inoviridae sp. 2219103 Viruses Viruses 189 1.5199999999999996e-43   NTclustered gi|2906148673|gb|PQ646408.1| 2219103 g117869 i0 98.148 0.721030042918455 108 2 46 0 126 233 3142 3249 MAG: Inoviridae sp. isolate k127_4036430 genomic sequence blastn 168 189 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
16140684 16140684 PRJNA849172_P_NODE_96493_length_248_cov_1.742857_g96133_i0 PRJNA849172 96493 248 1.742857 4.32228536 Scuticavirus SMA6 2011078 Viruses Viruses 357 4.24e-94   NTclustered gi|1694995567|ref|NC_043029.1| 1346893 g96133 i0 92.742 5.81048387096774 248 16 99 2 1 247 4951 4705 Stenotrophomonas phage phiSMA6 proviral complete genome blastn 1441 357 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae Scuticavirus Scuticavirus SMA6
17415011 17415011 PRJNA849172_P_NODE_57714_length_284_cov_1.573460_g57354_i0 PRJNA849172 57714 284 1.57346 4.4686264 Inoviridae sp. 2219103 Viruses Viruses 243 1.45e-59   NTclustered gi|2906156750|gb|PQ646969.1| 2219103 g57354 i0 84.375 0.901408450704225 256 31 90 6 1 256 6862 7108 MAG: Inoviridae sp. isolate k127_4105812 genomic sequence blastn 256 243 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
22514060 22514060 PRJNA849172_P_NODE_74498_length_265_cov_1.625000_g74138_i0 PRJNA849172 74498 265 1.625 4.30625 Inoviridae sp. 2219103 Viruses Viruses 340 4.62e-89   NTclustered gi|2906152048|gb|PQ646632.1| 2219103 g74138 i0 90.661 0.969811320754717 257 22 97 2 1 256 4215 4470 MAG: Inoviridae sp. isolate k127_3879901 genomic sequence blastn 257 340 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;