RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA846486" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA846486 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2108814 2108814 PRJNA846486_P_NODE_90222_length_163_cov_1.350877_g90126_i0 PRJNA846486 90222 163 1.350877 2.20192951 Rhizopus homothallicus 86632 Fungi Fungi 62.1 2.26e-5   NTclustered gi|1240502106|gb|KX980502.1| 86632 g90126 i0 88.235 0.312883435582822 51 6 31 0 113 163 51 1 Rhizopus homothallicus strain HP487 28S ribosomal RNA gene, partial sequence blastn 51 62.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus homothallicus
19082953 19082953 PRJNA846486_P_NODE_32335_length_234_cov_1.562162_g32239_i0 PRJNA846486 32335 234 1.562162 3.65545908 Mucorales 4827 Fungi Fungi 89.8 1.6e-13   NTclustered gi|2432197644|ref|XM_053125881.1| 64656 g32239 i0 93.333 5.05128205128205 60 4 26 0 1 60 928 987 Zychaea mexicana 60S ribosomal protein L3 (BDB00DRAFT_858678), mRNA blastn 1182 89.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;