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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA846486" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA846486 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7211365 7211365 PRJNA846486_P_NODE_27586_length_250_cov_1.208955_g27490_i0 PRJNA846486 27586 250 1.208955 3.0223875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 300 7.32e-77   NTclustered gi|290981067|ref|XM_002673207.1| 5762 g27490 i0 88.4 1 250 27 99 2 2 250 299 51 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80999), mRNA blastn 250 300 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13586961 13586961 PRJNA846486_P_NODE_7511_length_445_cov_4.320707_g7417_i0 PRJNA846486 7511 445 4.320707 19.22714615 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 721 0   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g7417 i0 95.964 30.3325842696629 446 15 100 3 1 445 1371 1814 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 13498 721 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
17411390 17411390 PRJNA846486_P_NODE_11274_length_369_cov_5.821875_g11179_i0 PRJNA846486 11274 369 5.821875 21.48271875 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 326 1.8699999999999999e-84   NTclustered gi|2124389574|ref|XM_044709659.1| 5763 g11179 i0 82.74 72.2547425474255 365 63 99 0 5 369 1118 754 Naegleria fowleri uncharacterized protein (FDP41_006065), partial mRNA blastn 26662 326 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
19959780 19959780 PRJNA846486_P_NODE_8996_length_411_cov_1.552486_g8901_i0 PRJNA846486 8996 411 1.552486 6.38071746 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 599 1.1199999999999995e-166   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g8901 i0 92.944 5.28223844282238 411 29 100 0 1 411 437 27 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 2171 599 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
21235466 21235466 PRJNA846486_P_NODE_95577_length_157_cov_2.500000_g95481_i0 PRJNA846486 95577 157 2.5 3.925 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 246 5.54e-61   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g95481 i0 94.904 57.3821656050955 157 8 100 0 1 157 632 476 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 9009 246 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;