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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA846486" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA846486 · 29 ✖

analysis 1

  • blastn · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
833213 833213 PRJNA846486_P_NODE_10721_length_378_cov_4.437690_g10626_i0 PRJNA846486 10721 378 4.43769 16.7744682 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 538 2.2699999999999998e-148   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10626 i0 94.318 40.4179894179894 352 18 93 2 28 378 1 351 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 15278 538 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
3384013 3384013 PRJNA846486_P_NODE_36003_length_224_cov_12.274286_g35907_i0 PRJNA846486 36003 224 12.274286 27.49440064 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.28e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g35907 i0 100 0.392857142857143 31 0 14 0 188 218 31 1 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 88 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
3783287 3783287 PRJNA846486_P_NODE_3123_length_653_cov_52.726821_g3042_i0 PRJNA846486 3123 653 52.726821 344.30614113 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 701 0   NTclustered gi|2082575652|gb|MZ825337.1| 2821798 g3042 i0 87.299 73.2159264931087 622 67 94 9 1 614 1070 453 Tetrahymena foissneri isolate ST 1 AV internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 47810 701 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena foissneri
7211363 7211363 PRJNA846486_P_NODE_25906_length_256_cov_3.057971_g25810_i0 PRJNA846486 25906 256 3.057971 7.82840576 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 134 8.080000000000001e-27   NTclustered gi|2072713056|gb|MH608212.2| 266149 g25810 i0 91.753 1.9609375 97 6 38 2 160 255 36766 36671 Pseudocohnilembus persalinus mitochondrion blastn 502 134 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
7211368 7211368 PRJNA846486_P_NODE_28706_length_245_cov_483.367347_g28610_i0 PRJNA846486 28706 245 483.367347 1184.25000015 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.75e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g28610 i0 100 0.359183673469388 31 0 13 0 209 239 31 1 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 88 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
7609459 7609459 PRJNA846486_P_NODE_28786_length_245_cov_2.158163_g28690_i0 PRJNA846486 28786 245 2.158163 5.28749935 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 431 2.4299999999999996e-116   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g28690 i0 98.367 95.8326530612245 245 4 100 0 1 245 2631 2387 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 23479 431 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8486036 8486036 PRJNA846486_P_NODE_1847_length_805_cov_2.149471_g1789_i0 PRJNA846486 1847 805 2.149471 17.30324155 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 1371 0   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g1789 i0 97.398 55.0422360248447 807 18 100 3 1 805 2297 1492 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 44309 1371 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
8486038 8486038 PRJNA846486_P_NODE_20367_length_283_cov_352.833333_g20271_i0 PRJNA846486 20367 283 352.833333 998.51833239 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.61e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g20271 i0 100 0.830388692579505 31 0 11 0 48 78 1 31 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 235 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
9761295 9761295 PRJNA846486_P_NODE_35228_length_226_cov_5.039548_g35132_i0 PRJNA846486 35228 226 5.039548 11.38937848 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 418 1.7199999999999998e-112   NTclustered gi|90657149|gb|DQ442807.1| 35100 g35132 i0 100 100.146017699115 226 0 100 0 1 226 68 293 Cyclidium glaucoma isolate ES31 28S ribosomal RNA gene, partial sequence blastn 22633 418 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
11036922 11036922 PRJNA846486_P_NODE_34449_length_228_cov_2.860335_g34353_i0 PRJNA846486 34449 228 2.860335 6.5215638 Stentor roeselii 1703786 SAR_Eukaryotes SAR_Eukaryotes 422 1.34e-113   NTclustered gi|921061859|gb|KP970274.1| 1703786 g34353 i0 100 72.2456140350877 228 0 100 0 1 228 96 323 Stentor roeselii isolate STR large subunit ribosomal RNA gene, partial sequence blastn 16472 422 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor roeselii
11036989 11036989 PRJNA846486_P_NODE_6629_length_471_cov_4.118483_g6537_i0 PRJNA846486 6629 471 4.118483 19.39805493 Tetrahymena furgasoni 5898 SAR_Eukaryotes SAR_Eukaryotes 865 0   NTclustered gi|1268580094|gb|KY218574.1| 5898 g6537 i0 99.788 97.4416135881104 471 1 100 0 1 471 84 554 Tetrahymena furgasoni isolate 20749-1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 45895 865 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena furgasoni
12312516 12312516 PRJNA846486_P_NODE_8190_length_428_cov_14.058047_g8096_i0 PRJNA846486 8190 428 14.058047 60.16844116 Euplotes aediculatus 5940 SAR_Eukaryotes SAR_Eukaryotes 634 3.219999999999999e-177   NTclustered gi|6980030|gb|AF223571.1|AF223571 5940 g8096 i0 95.918 87.3878504672897 392 14 91 2 38 428 553 943 Euplotes aediculatus internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 37402 634 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes aediculatus
12711079 12711079 PRJNA846486_P_NODE_83290_length_166_cov_1.034188_g83194_i0 PRJNA846486 83290 166 1.034188 1.71675208 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 241 2.76e-59   NTclustered gi|6980029|gb|AF223570.1|AF223570 114794 g83194 i0 92.814 84.2590361445783 167 10 100 2 1 166 2865 3030 Spathidium amphoriforme internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13987 241 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida Spathidiidae Epispathidium Epispathidium amphoriforme
13586837 13586837 PRJNA846486_P_NODE_18411_length_296_cov_1.668016_g18315_i0 PRJNA846486 18411 296 1.668016 4.93732736 Thigmokeronopsis stoecki 552938 SAR_Eukaryotes SAR_Eukaryotes 69.4 2.73e-7   NTclustered gi|404425851|gb|JQ424844.1| 552938 g18315 i0 95.349 1.19932432432432 43 2 15 0 126 168 162 204 Thigmokeronopsis stoecki voucher LLQ07052501 28S ribosomal RNA gene, partial sequence blastn 355 69.4 1 Eukaryota Sar   Ciliophora Spirotrichea Urostylida Pseudokeronopsidae Thigmokeronopsis Thigmokeronopsis stoecki
14861135 14861135 PRJNA846486_P_NODE_20552_length_282_cov_387.592275_g20456_i0 PRJNA846486 20552 282 387.592275 1093.0102155 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.59e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g20456 i0 100 0.833333333333333 31 0 11 0 205 235 31 1 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 235 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
14861202 14861202 PRJNA846486_P_NODE_52172_length_195_cov_1.068493_g52076_i0 PRJNA846486 52172 195 1.068493 2.08356135 Pseudourostyla cristata 293816 SAR_Eukaryotes SAR_Eukaryotes 122 1.2699999999999999e-23   NTclustered gi|67462289|gb|DQ062086.1| 293816 g52076 i0 78.238 9.98974358974359 193 40 98 2 1 192 1281 1472 Pseudourostyla cristata heat shock protein 90 mRNA, complete cds; macronuclear blastn 1948 122 1 Eukaryota Sar   Ciliophora Spirotrichea Urostylida Pseudourostylidae Pseudourostyla Pseudourostyla cristata
15259424 15259424 PRJNA846486_P_NODE_61332_length_183_cov_1.805970_g61236_i0 PRJNA846486 61332 183 1.80597 3.3049251 Ophrydium 168250 SAR_Eukaryotes SAR_Eukaryotes 339 1.07e-88   NTclustered gi|2198905071|gb|OM801561.1| 2919885 g61236 i0 100 100 183 0 100 0 1 183 1532 1350 Ophrydium crassicaule isolate WT2020072401 small subunit ribosomal RNA gene, partial sequence blastn 18300 339 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Ophrydiidae Ophrydium Ophrydium crassicaule
16135895 16135895 PRJNA846486_P_NODE_13973_length_334_cov_12.396491_g13877_i0 PRJNA846486 13973 334 12.396491 41.40427994 Coleps hirtus 60000 SAR_Eukaryotes SAR_Eukaryotes 525 1.5399999999999994e-144   NTclustered gi|2026535536|gb|MW929305.1| 60000 g13877 i0 95.195 99.9131736526946 333 14 99 2 1 332 2233 2564 Coleps hirtus strain AG Berninger/Pickham Uni Salzburg small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 33371 525 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Coleps Coleps hirtus
16135923 16135923 PRJNA846486_P_NODE_3073_length_657_cov_40.616776_g2992_i0 PRJNA846486 3073 657 40.616776 266.85221832 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 1081 0   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g2992 i0 98.22 68 618 11 94 0 1 618 1080 463 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44676 1081 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
19083003 19083003 PRJNA846486_P_NODE_96135_length_154_cov_5.571429_g96039_i0 PRJNA846486 96135 154 5.571429 8.58000066 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 274 2.48e-69   NTclustered gi|21780034|gb|AF508773.1| 5949 g96039 i0 98.701 99.0649350649351 154 2 100 0 1 154 2156 2003 Stylonychia lemnae 17S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 15256 274 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
21235450 21235450 PRJNA846486_P_NODE_92137_length_162_cov_2.300885_g92041_i0 PRJNA846486 92137 162 2.300885 3.7274337 uncultured haptorid ciliate 282486 SAR_Eukaryotes SAR_Eukaryotes 289 9.44e-74   NTclustered gi|2006881171|emb|HG996127.1| 282486 g92041 i0 98.765 100.154320987654 162 2 100 0 1 162 659 498 uncultured haptorid ciliate genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, clone b167ffb8 blastn 16225 289 1 Eukaryota Sar   Ciliophora Litostomatea Haptorida     uncultured haptorid ciliate
22510100 22510100 PRJNA846486_P_NODE_47218_length_202_cov_1.699346_g47122_i0 PRJNA846486 47218 202 1.699346 3.43267892 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 340 3.35e-89   NTclustered gi|829160572|ref|XM_001012497.3| 312017 g47122 i0 97.03 36.3316831683168 202 6 100 0 1 202 357 156 Tetrahymena thermophila SB210 60S ribosomal protein L10 partial mRNA blastn 7339 340 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
22510140 22510140 PRJNA846486_P_NODE_68358_length_176_cov_1.228346_g68262_i0 PRJNA846486 68358 176 1.228346 2.16188896 Tetrahymena furgasoni 5898 SAR_Eukaryotes SAR_Eukaryotes 326 7.92e-85   NTclustered gi|1268580055|gb|KY218535.1| 5898 g68262 i0 100 58.0170454545455 176 0 100 0 1 176 54 229 Tetrahymena furgasoni isolate 20749-1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 10211 326 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena furgasoni
23785680 23785680 PRJNA846486_P_NODE_9479_length_400_cov_292.609687_g9384_i0 PRJNA846486 9479 400 292.609687 1170.438748 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 58.4 8.24e-4   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g9384 i0 100 0.22 31 0 8 0 364 394 31 1 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 88 58.4 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
25059428 25059428 PRJNA846486_P_NODE_30380_length_240_cov_1.361257_g30284_i0 PRJNA846486 30380 240 1.361257 3.2670168 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 161 3.4399999999999996e-35   NTclustered gi|829099897|ref|XM_001007130.2| 312017 g30284 i0 79.339 1.00833333333333 242 40 99 8 3 239 4651 4887 Tetrahymena thermophila SB210 ABC transporter family protein partial mRNA blastn 242 161 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
25059473 25059473 PRJNA846486_P_NODE_55100_length_191_cov_1.161972_g55004_i0 PRJNA846486 55100 191 1.161972 2.21936652 Remanella sp. 1 BS-2022 2930476 SAR_Eukaryotes SAR_Eukaryotes 63.9 7.59e-6   NTclustered gi|2261269021|emb|OX095846.1| 2930476 g55004 i0 97.368 0.387434554973822 38 0 20 1 148 185 37 1 Remanella sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863273, clone N44:18S_rRNA::TRINITY_DN644_c0_g1_i12:99-1693(+) blastn 74 63.9 1 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Remanella Remanella sp. 1 BS-2022
25458015 25458015 PRJNA846486_P_NODE_5560_length_510_cov_85.065076_g5470_i0 PRJNA846486 5560 510 85.065076 433.8318876 root 1 Root_unresolved Root_unresolved 915 0   NTclustered gi|345541658|gb|JN547815.1| 5911 g5470 i0 99.02 98.5254901960784 510 5 100 0 1 510 3302 3811 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 50248 915 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
25458022 25458022 PRJNA846486_P_NODE_69120_length_175_cov_1.492063_g69024_i0 PRJNA846486 69120 175 1.492063 2.61111025 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 318 1.32e-82   NTclustered gi|2624665740|gb|OR878269.1| 5908 g69024 i0 99.429 100 175 1 100 0 1 175 306 132 Tetrahymena pyriformis isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence blastn 17500 318 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
25458055 25458055 PRJNA846486_P_NODE_9400_length_402_cov_2.767705_g9305_i0 PRJNA846486 9400 402 2.767705 11.1261741 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 507 6.84e-139   NTclustered gi|10370|emb|X56167.1| 5892 g9305 i0 94.03 84.365671641791 335 18 83 2 1 334 567 234 T.australis gene for small subunit ribosomal RNA (16S like rRNA) blastn 33915 507 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena australis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;