RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA846486" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA846486 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8486030 8486030 PRJNA846486_P_NODE_14067_length_333_cov_4.658451_g13971_i0 PRJNA846486 14067 333 4.658451 15.51264183 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 115 3.95e-21   NTclustered gi|2754691654|gb|PP872616.1| 3003959 g13971 i0 80.124 0.966966966966967 161 27 47 5 7 164 6420 6262 MAG: Picornavirales sp. isolate TC-PLV-60 MR233-17E/328 genomic sequence blastn 322 115 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
18684610 18684610 PRJNA846486_P_NODE_64015_length_180_cov_1.885496_g63919_i0 PRJNA846486 64015 180 1.885496 3.3938928 Tolivirales sp. 2809914 Viruses Viruses 300 4.94e-77   NTclustered gi|2647549457|gb|OR843652.1| 2809914 g63919 i0 96.667 1 180 6 100 0 1 180 2980 2801 Tolivirales sp. strain MR233-17E/2125 polyprotein, tombus P33-like protein, and structural protein genes, complete cds blastn 180 300 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Tolivirales sp.
18684633 18684633 PRJNA846486_P_NODE_73075_length_171_cov_2.278689_g72979_i0 PRJNA846486 73075 171 2.278689 3.89655819 Canine astrovirus 1157338 Viruses Viruses 311 2.14e-80   NTclustered gi|1355917460|gb|MF973500.1| 1157338 g72979 i0 99.415 72.8830409356725 171 1 100 0 1 171 6422 6592 Canine astrovirus strain CHN/2017/44, complete genome blastn 12463 311 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae Mamastrovirus Canine astrovirus
21235370 21235370 PRJNA846486_P_NODE_63257_length_181_cov_1.575758_g63161_i0 PRJNA846486 63257 181 1.575758 2.85212198 Orthoreovirus piscis 3431498 Viruses Viruses 235 1.42e-57   NTclustered gi|2634039173|gb|OR872662.1| 1157337 g63161 i0 90.164 19.8729281767956 183 14 99 3 1 180 1920 2101 Piscine orthoreovirus isolate WADDL:2021-1143 mu1 protein gene, partial cds blastn 3597 235 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Orthoreovirus Orthoreovirus piscis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;