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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA846486" and tax_clade = "Amoebozoa"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJNA846486 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16136036 16136036 PRJNA846486_P_NODE_83473_length_166_cov_0.888889_g83377_i0 PRJNA846486 83473 166 0.888889 1.47555574 Dictyostelium purpureum 5786 Evosea other_Eukaryota 106 1.05e-18   NTclustered gi|2595975776|ref|XM_003288996.2| 5786 g83377 i0 84.762 3.39156626506024 105 16 63 0 7 111 420 316 Dictyostelium purpureum proteasome subunit alpha type 7 (DICPUDRAFT_48337), partial mRNA blastn 563 106 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
25059402 25059402 PRJNA846486_P_NODE_21340_length_278_cov_1.751092_g21244_i0 PRJNA846486 21340 278 1.751092 4.86803576 Armaparvus browni 3387425 Evosea other_Eukaryota 97.1 1.17e-15   NTclustered gi|2871328632|gb|PQ778044.1| 3387425 g21244 i0 92.647 18.7158273381295 68 4 24 1 7 74 1349 1415 Armaparvus browni strain ZIN.2023.15 small subunit ribosomal RNA gene, partial sequence blastn 5203 97.1 1 Eukaryota Amoebozoa   Evosea       Armaparvus Armaparvus browni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;