RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA846110" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA846110 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5936253 5936253 PRJNA846110_P_NODE_25325_length_247_cov_1.597701_g25080_i0 PRJNA846110 25325 247 1.597701 3.94632147 Lytechinus pictus 7653 Echinodermata other_Eukaryota 63.9 1.03e-5   NTclustered gi|2707410035|ref|XM_054909153.2| 7653 g25080 i0 93.182 0.356275303643725 44 1 17 2 205 247 1695 1737 PREDICTED: Lytechinus pictus low-density lipoprotein receptor-related protein 12-like (LOC129271897), transcript variant X2, mRNA blastn 88 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
7211041 7211041 PRJNA846110_P_NODE_10246_length_337_cov_1.015152_g10002_i0 PRJNA846110 10246 337 1.015152 3.42106224 Asterias rubens 7604 Echinodermata other_Eukaryota 239 2.27e-58   NTclustered gi|1834300654|ref|XM_033770377.1| 7604 g10002 i0 83.019 81.5756676557863 265 43 78 2 31 294 7871 7608 PREDICTED: Asterias rubens CCR4-NOT transcription complex subunit 1-like (LOC117289308), mRNA blastn 27491 239 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;