RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA846110" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA846110 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4661487 4661487 PRJNA846110_P_NODE_23744_length_249_cov_3.159091_g23499_i0 PRJNA846110 23744 249 3.159091 7.86613659 Orthophasmavirus wuchangense 3052553 Viruses Viruses 438 1.4799999999999996e-118   NTclustered gi|1070619511|ref|NC_031293.1| 1608097 g23499 i0 98.394 1 249 4 100 0 1 249 4796 5044 Wuchang Cockraoch Virus 1 strain WCZL-5 RNA-dependent RNA polymerase (L) gene, complete cds blastn 249 438 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae Orthophasmavirus Orthophasmavirus wuchangense
7211228 7211228 PRJNA846110_P_NODE_26746_length_245_cov_3.802326_g26501_i0 PRJNA846110 26746 245 3.802326 9.3156987 Orthophasmavirus wuchangense 3052553 Viruses Viruses 442 1.1199999999999994e-119   NTclustered gi|1070619511|ref|NC_031293.1| 1608097 g26501 i0 99.184 1 245 2 100 0 1 245 5576 5332 Wuchang Cockraoch Virus 1 strain WCZL-5 RNA-dependent RNA polymerase (L) gene, complete cds blastn 245 442 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae Orthophasmavirus Orthophasmavirus wuchangense
8485767 8485767 PRJNA846110_P_NODE_10867_length_328_cov_2.333333_g10622_i0 PRJNA846110 10867 328 2.333333 7.65333224 Orthophasmavirus wuchangense 3052553 Viruses Viruses 595 1.1399999999999998e-165   NTclustered gi|1070619511|ref|NC_031293.1| 1608097 g10622 i0 99.39 1.98170731707317 328 2 100 0 1 328 4301 3974 Wuchang Cockraoch Virus 1 strain WCZL-5 RNA-dependent RNA polymerase (L) gene, complete cds blastn 650 595 1 Viruses   Orthornavirae Negarnaviricota Bunyaviricetes Elliovirales Phasmaviridae Orthophasmavirus Orthophasmavirus wuchangense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;