RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA846086" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA846086 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5936012 5936012 PRJNA846086_P_NODE_1325_length_326_cov_1.213439_g1259_i0 PRJNA846086 1325 326 1.213439 3.95581114 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 243 1.69e-59   NTclustered gi|563351663|gb|CP006913.1| 1394709 g1259 i0 80.363 196.027607361963 331 55 100 9 1 326 126326 126001 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 63905 243 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
11036528 11036528 PRJNA846086_P_NODE_1869_length_285_cov_3.122642_g1803_i0 PRJNA846086 1869 285 3.122642 8.8995297 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 320 6.54e-83   NTclustered gi|563351663|gb|CP006913.1| 1394709 g1803 i0 88.192 111.985964912281 271 29 94 3 1 269 125567 125298 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 31916 320 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
13586549 13586549 PRJNA846086_P_NODE_971_length_372_cov_1.030100_g905_i0 PRJNA846086 971 372 1.0301 3.831972 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 409 1.82e-109   NTclustered gi|563351663|gb|CP006913.1| 1394709 g905 i0 86.721 140.688172043011 369 47 99 2 1 367 127286 126918 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 52336 409 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;