RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA841653 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11034214 11034214 PRJNA841653_P_NODE_33009_length_284_cov_7.947867_g32335_i0 PRJNA841653 33009 284 7.947867 22.57194228 Zancudomyces culisetae 1213189 Fungi Fungi 187 6.889999999999998e-43   NTclustered gi|360040380|gb|JN940490.1| 1213189 g32335 i0 88.889 51.6443661971831 153 16 54 1 1 152 1101 949 Smittium culisetae strain MAL-X-1 28S ribosomal RNA (LSU) gene, partial sequence blastn 14667 187 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Zancudomyces Zancudomyces culisetae
12309538 12309538 PRJNA841653_P_NODE_28530_length_305_cov_1.284483_g27856_i0 PRJNA841653 28530 305 1.284483 3.91767315 Kickxella alabastrina 61397 Fungi Fungi 226 1.58e-54   NTclustered gi|2324013866|ref|XM_051535874.1| 61397 g27856 i0 80.519 93.5934426229508 308 48 99 10 5 305 96 398 Kickxella alabastrina ribosomal protein L1 (BX661DRAFT_182039), mRNA blastn 28546 226 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
14857936 14857936 PRJNA841653_P_NODE_11332_length_495_cov_1.390995_g10663_i0 PRJNA841653 11332 495 1.390995 6.88542525 Furculomyces boomerangus 61424 Fungi Fungi 357 9.149999999999998e-94   NTclustered gi|358030847|dbj|AB609157.1| 61424 g10663 i0 80.417 17.9050505050505 480 85 96 9 13 487 1085 1560 Furculomyces boomerangus EF2 gene for translation elongation factor 2, partial cds, strain: BL059 blastn 8863 357 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Furculomyces Furculomyces boomerangus
17808295 17808295 PRJNA841653_P_NODE_3394_length_947_cov_4.265446_g2873_i0 PRJNA841653 3394 947 4.265446 40.39377362 Piptocephalis 78916 Fungi Fungi 110 5.6e-19   NTclustered gi|913748581|ref|NG_042414.1| 78909 g2873 i0 86.275 11.8152059134108 102 12 11 2 700 800 2090 2190 Piptocephalis moniliformis NRRL 13723 28S rRNA, partial sequence; from TYPE material blastn 11189 110 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis moniliformis
23783269 23783269 PRJNA841653_P_NODE_61299_length_241_cov_0.916667_g60625_i0 PRJNA841653 61299 241 0.916667 2.20916747 Conidiobolus coronatus 34488 Fungi Fungi 220 5.62e-53   NTclustered gi|6492312|gb|AF162057.1|AF162057 34488 g60625 i0 83.983 82.9004149377593 231 35 95 2 12 241 579 808 Conidiobolus coronatus beta-tubulin 2 (btub) gene, partial cds blastn 19979 220 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus coronatus
25057026 25057026 PRJNA841653_P_NODE_54840_length_245_cov_0.895349_g54166_i0 PRJNA841653 54840 245 0.895349 2.19360505 Conidiobolus mycophagus 1368622 Fungi Fungi 99 2.8e-16   NTclustered gi|2127863504|ref|NC_058638.1| 1368622 g54166 i0 88.889 1.15918367346939 81 7 32 1 118 196 22307 22387 Conidiobolus mycophagus culture ATCC:16201 mitochondrion, complete genome blastn 284 99 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Conidiobolus Conidiobolus mycophagus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;