RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA841653 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7208832 7208832 PRJNA841653_P_NODE_4146_length_849_cov_2.331186_g3573_i0 PRJNA841653 4146 849 2.331186 19.79176914 Haliclona sp. BKON-2565 3127636 Porifera other_Eukaryota 215 1.03e-50   NTclustered gi|2899163455|gb|PP464275.1| 3127636 g3573 i0 77.957 29.9717314487633 372 63 43 12 478 839 1835 2197 Haliclona sp. BKON-2565 isolate H2565 mitochondrion, complete genome blastn 25446 215 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Chalinidae Haliclona Haliclona sp. BKON-2565
16133737 16133737 PRJNA841653_P_NODE_6613_length_661_cov_14.880952_g5975_i0 PRJNA841653 6613 661 14.880952 98.36309272 Leucopsacus sp. BX12/6 472223 Porifera other_Eukaryota 141 1.37e-28   NTclustered gi|190350210|emb|AM886365.1| 472223 g5975 i0 87.097 18.8441754916793 124 16 19 0 153 276 590 713 Leucopsacus sp. BX12/6 partial 28S rRNA gene, isolated from Ireland blastn 12456 141 1 Eukaryota Opisthokonta Metazoa Porifera Hexactinellida Lyssacinosida Leucopsacidae Leucopsacus Leucopsacus sp. BX12/6

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;