RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA841653 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2106170 2106170 PRJNA841653_P_NODE_45002_length_250_cov_0.870056_g44328_i0 PRJNA841653 45002 250 0.870056 2.17514 uncultured Mollicutes bacterium 220137 Bacteria Bacteria 305 1.57e-78   NTclustered gi|2187163481|emb|OV788639.1| 220137 g44328 i0 89.069 902.968 247 26 98 1 5 250 263825 264071 uncultured Mollicutes bacterium isolate min17_bin64 genome assembly, chromosome: 1 blastn 225742 305 1 Bacteria   Bacillati Mycoplasmatota Mollicutes       uncultured Mollicutes bacterium
7208523 7208523 PRJNA841653_P_NODE_25686_length_322_cov_1.216867_g25012_i0 PRJNA841653 25686 322 1.216867 3.91831174 uncultured Mycoplasmatota bacterium 658143 Bacteria Bacteria 254 7.72e-63   NTclustered gi|2187163482|emb|OV788640.1| 658143 g25012 i0 82.06 430.835403726708 301 51 93 3 9 308 373471 373769 uncultured Tenericutes bacterium isolate min17_bin11 genome assembly, chromosome: 1 blastn 138729 254 1 Bacteria   Bacillati Mycoplasmatota         uncultured Mycoplasmatota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;