RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA841653 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8483333 8483333 PRJNA841653_P_NODE_36407_length_272_cov_84.361809_g35733_i0 PRJNA841653 36407 272 84.361809 229.46412048 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 137 6.7e-28   NTclustered gi|605060084|gb|KF874224.1| 109801 g35733 i0 86.992 46.8676470588235 123 14 45 2 1 123 353 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12748 137 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
9758573 9758573 PRJNA841653_P_NODE_38048_length_267_cov_1.474227_g37374_i0 PRJNA841653 38048 267 1.474227 3.93618609 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940712|emb|OZ237560.1| 6108 g37374 i0 96.97 0.123595505617978 33 1 12 0 22 54 5339120 5339088 Anemonia sulcata genome assembly, chromosome: 6 blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
9758911 9758911 PRJNA841653_P_NODE_56368_length_244_cov_0.900585_g55694_i0 PRJNA841653 56368 244 0.900585 2.1974274 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|1619638870|ref|XM_021044261.2| 2652724 g55694 i0 100 0.344262295081967 28 0 11 0 83 110 950 923 PREDICTED: Exaiptasia diaphana arylsulfatase B (LOC110238578), transcript variant X1, mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
11034595 11034595 PRJNA841653_P_NODE_54549_length_245_cov_0.895349_g53875_i0 PRJNA841653 54549 245 0.895349 2.19360505 Acropora muricata 159855 Cnidaria other_Eukaryota 368 1.93e-97   NTclustered gi|2784727371|ref|XM_067192517.1| 159855 g53875 i0 96.413 3.64081632653061 223 8 91 0 1 223 1762 1540 PREDICTED: Acropora muricata NPC intracellular cholesterol transporter 1-like (LOC136923993), transcript variant X2, mRNA blastn 892 368 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata
17408544 17408544 PRJNA841653_P_NODE_27374_length_312_cov_0.866109_g26700_i0 PRJNA841653 27374 312 0.866109 2.70226008 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|1778035537|ref|XM_031699269.1| 6105 g26700 i0 96.875 0.512820512820513 32 1 10 0 107 138 2711 2680 PREDICTED: Actinia tenebrosa SH3 domain-containing protein 19-like (LOC116292033), transcript variant X2, mRNA blastn 160 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
23783373 23783373 PRJNA841653_P_NODE_8119_length_593_cov_13.973077_g7460_i0 PRJNA841653 8119 593 13.973077 82.86034661 Eunicella cavolini 317547 Cnidaria other_Eukaryota 187 1.54e-42   NTclustered gi|2918369537|emb|OZ237719.1| 317547 g7460 i0 81.858 55.1197301854975 226 37 39 4 269 494 26608682 26608461 Eunicella cavolini genome assembly, chromosome: 3 blastn 32686 187 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;