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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA841653 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
830919 830919 PRJNA841653_P_NODE_57861_length_243_cov_0.905882_g57187_i0 PRJNA841653 57861 243 0.905882 2.20129326 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 195 3.4399999999999997e-45   NTclustered gi|2874253812|emb|OY969796.1| 1672391 g57187 i0 82.949 1.0082304526749 217 35 89 2 27 242 2346004 2346219 MAG: uncultured Chloroflexia bacterium isolate MFD01872.bin.1.103 genome assembly, chromosome: 1 blastn 245 195 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
9758609 9758609 PRJNA841653_P_NODE_39868_length_261_cov_1.595745_g39194_i0 PRJNA841653 39868 261 1.595745 4.16489445 Candidatus Chlorohelix allophototropha 3003348 Bacteria Bacteria 196 1.04e-45   NTclustered gi|2530750984|gb|CP128400.1| 3003348 g39194 i0 81.853 50.7432950191571 259 23 99 8 3 261 320892 320658 Candidatus Chlorohelix allophototropha isolate L227-S17 chromosome 2, complete sequence blastn 13244 196 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales Candidatus Chloroheliaceae Candidatus Chlorohelix Candidatus Chlorohelix allophototropha
11034073 11034073 PRJNA841653_P_NODE_26669_length_316_cov_0.938272_g25995_i0 PRJNA841653 26669 316 0.938272 2.96493952 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 462 1.15e-125   NTclustered gi|1188269816|gb|MF002242.1| 166587 g25995 i0 94.098 92.1930379746835 305 16 97 2 12 316 100 402 Uncultured Chloroflexota bacterium clone 716_53 16S ribosomal RNA gene, partial sequence blastn 29133 462 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
13584589 13584589 PRJNA841653_P_NODE_58031_length_243_cov_0.905882_g57357_i0 PRJNA841653 58031 243 0.905882 2.20129326 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 148 2.72e-31   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g57357 i0 83.974 6.66255144032922 156 23 64 2 5 159 746977 747131 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 1619 148 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
16133105 16133105 PRJNA841653_P_NODE_29493_length_300_cov_1.334802_g28819_i0 PRJNA841653 29493 300 1.334802 4.004406 uncultured Longilinea sp. 527666 Bacteria Bacteria 172 2.05e-38   NTclustered gi|310350678|gb|HQ058438.1| 527666 g28819 i0 83.784 59.3133333333333 185 27 61 2 105 286 111 295 Uncultured Longilinea sp. clone F5OHPNU07H37CV 16S ribosomal RNA gene, partial sequence blastn 17794 172 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Longilinea uncultured Longilinea sp.
17408857 17408857 PRJNA841653_P_NODE_42814_length_252_cov_1.636872_g42140_i0 PRJNA841653 42814 252 1.636872 4.12491744 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 159 1.31e-34   NTclustered gi|2893356072|emb|OZ220495.1| 2026734 g42140 i0 80.087 7.51190476190476 231 32 88 12 31 252 616023 615798 MAG: Dehalococcoidia bacterium isolate 23c5d8d9-c01e-4714-bf51-3e77b66f12ef genome assembly, chromosome: 1 blastn 1893 159 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
17409210 17409210 PRJNA841653_P_NODE_63514_length_232_cov_2.767296_g62840_i0 PRJNA841653 63514 232 2.767296 6.42012672 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 279 8.74e-71   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g62840 i0 88.987 17.5387931034483 227 23 97 2 2 227 275999 275774 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 4069 279 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
18681735 18681735 PRJNA841653_P_NODE_32735_length_286_cov_0.985915_g32061_i0 PRJNA841653 32735 286 0.985915 2.8197169 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 285 2.39e-72   NTclustered gi|470481958|ref|NR_076505.1| 357808 g32061 i0 87.451 7.37762237762238 255 22 89 6 27 280 1401 1156 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 2110 285 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
19957142 19957142 PRJNA841653_P_NODE_45836_length_250_cov_0.870056_g45162_i0 PRJNA841653 45836 250 0.870056 2.17514 Roseiflexus castenholzii 120962 Bacteria Bacteria 69.4 2.25e-7   NTclustered gi|156231356|gb|CP000804.1| 383372 g45162 i0 93.617 6.784 47 1 19 2 169 215 4888816 4888860 Roseiflexus castenholzii DSM 13941, complete genome blastn 1696 69.4 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus castenholzii
21632980 21632980 PRJNA841653_P_NODE_63157_length_236_cov_3.208589_g62483_i0 PRJNA841653 63157 236 3.208589 7.57227004 Chloroflexota 200795 Bacteria Bacteria 198 2.57e-46   NTclustered gi|2874253882|emb|OY969938.1| 1672391 g62483 i0 86.022 6.72457627118644 186 25 78 1 43 227 2063918 2063733 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.c.1 genome assembly, chromosome: 1 blastn 1587 198 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
25056994 25056994 PRJNA841653_P_NODE_53120_length_246_cov_0.890173_g52446_i0 PRJNA841653 53120 246 0.890173 2.18982558 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 207 4.48e-49   NTclustered gi|2874253860|emb|OY969916.1| 1672391 g52446 i0 82.231 0.983739837398374 242 41 98 2 6 246 1889847 1889607 MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 blastn 242 207 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;