RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA841653 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11034561 11034561 PRJNA841653_P_NODE_52529_length_246_cov_0.890173_g51855_i0 PRJNA841653 52529 246 0.890173 2.18982558 Candidatus Nitrosymbiomonas proteolyticus 2608984 Bacteria Bacteria 387 5.36e-103   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g51855 i0 95.102 243.520325203252 245 12 99 0 2 246 34924 34680 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 59906 387 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
22908100 22908100 PRJNA841653_P_NODE_19478_length_370_cov_1.252525_g18806_i0 PRJNA841653 19478 370 1.252525 4.6343425 Chthonomonas 1077265 Bacteria Bacteria 368 3.07e-97   NTclustered gi|526641997|ref|NR_103994.1| 454171 g18806 i0 84.906 128.032432432432 371 48 100 8 1 370 1515 1878 Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence blastn 47372 368 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;