RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA841653" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA841653 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5934066 5934066 PRJNA841653_P_NODE_56045_length_244_cov_0.900585_g55371_i0 PRJNA841653 56045 244 0.900585 2.1974274 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 185 2.0799999999999994e-42   NTclustered gi|2621703606|emb|OY761465.1| 2838779 g55371 i0 80.579 19.172131147541 242 45 99 2 4 244 793087 792847 MAG: Candidatus Binatia bacterium isolate d3e24e22-6b5b-4867-8422-75782eed2520 genome assembly, chromosome: 1 blastn 4678 185 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
11034266 11034266 PRJNA841653_P_NODE_35389_length_276_cov_1.487685_g34715_i0 PRJNA841653 35389 276 1.487685 4.1060106 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 462 9.89e-126   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g34715 i0 97.761 243.25 268 6 97 0 9 276 667801 667534 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 67137 462 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
11034340 11034340 PRJNA841653_P_NODE_39129_length_264_cov_1.068063_g38455_i0 PRJNA841653 39129 264 1.068063 2.81968632 Candidatus Nanosynbacter sp. HMT-352 2899133 Bacteria Bacteria 449 7.320000000000001e-122   NTclustered gi|2166692445|gb|CP089520.1| 2899133 g38455 i0 97.348 181.25 264 7 100 0 1 264 75507 75770 Candidatus Nanosynbacter sp. HMT-352 strain KC1 chromosome, complete genome blastn 47850 449 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-352
11034430 11034430 PRJNA841653_P_NODE_44109_length_251_cov_0.865169_g43435_i0 PRJNA841653 44109 251 0.865169 2.17157419 Candidatus Saccharibacteria bacterium TM7i 2980174 Bacteria Bacteria 141 4.72e-29   NTclustered gi|2306681518|gb|CP075337.1| 2980174 g43435 i0 88 38.199203187251 125 7 48 6 130 250 669556 669436 Candidatus Saccharibacteria bacterium TM7i chromosome, complete genome blastn 9588 141 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium TM7i
19082149 19082149 PRJNA841653_P_NODE_19735_length_367_cov_2.061224_g19063_i0 PRJNA841653 19735 367 2.061224 7.56469208 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 645 1.2599999999999995e-180   NTclustered gi|1842054184|gb|CP039999.1| 713059 g19063 i0 99.162 78.0108991825613 358 3 98 0 9 366 143482 143839 Candidatus Saccharibacteria bacterium oral taxon 488 strain CM001 chromosome, complete genome blastn 28630 645 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
22506843 22506843 PRJNA841653_P_NODE_12618_length_466_cov_1.513995_g11947_i0 PRJNA841653 12618 466 1.513995 7.0552167 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 664 0   NTclustered gi|2874253985|emb|OY970310.1| 2803731 g11947 i0 92.826 395.976394849785 460 30 98 3 8 466 337177 336720 MAG: Candidatus Babeliales bacterium isolate MFD05512.bin.c.16 genome assembly, chromosome: 1 blastn 184525 664 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;