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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA839281" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA839281 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4658140 4658140 PRJNA839281_S_NODE_28324_length_166_cov_0.871795_g28055_i0 PRJNA839281 28324 166 0.871795 1.4471797 Natronorarus salvus 3117733 Archaea Archaea 132 1.74e-26   NTclustered gi|2670420129|gb|CP144125.1| 3117733 g28055 i0 87.611 0.680722891566265 113 14 68 0 21 133 2333425 2333537 Natronorarus salvus strain CGA53 chromosome, complete genome blastn 113 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halalkalicoccaceae Natronorarus Natronorarus salvus
12309026 12309026 PRJNA839281_S_NODE_36850_length_161_cov_0.910714_g36581_i0 PRJNA839281 36850 161 0.910714 1.46624954 Natrinema sp. J7-2 406552 Archaea Archaea 141 2.78e-29   NTclustered gi|397680883|gb|CP003412.1| 406552 g36581 i0 83.784 3.66459627329193 148 24 92 0 2 149 123201 123054 Natrinema sp. J7-2, complete genome blastn 590 141 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrinema Natrinema sp. J7-2
17408027 17408027 PRJNA839281_S_NODE_33394_length_163_cov_0.894737_g33125_i0 PRJNA839281 33394 163 0.894737 1.45842131 Haloplanus pelagicus 2949995 Archaea Archaea 292 7.35e-75   NTclustered gi|2252468272|gb|CP098519.1| 2949995 g33125 i0 99.379 8.93865030674847 161 1 99 0 2 162 64783 64623 Haloplanus sp. HW8-1 plasmid unnamed1, complete sequence blastn 1457 292 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus pelagicus
19081864 19081864 PRJNA839281_S_NODE_13975_length_215_cov_1.228916_g13706_i0 PRJNA839281 13975 215 1.228916 2.6421694 Haloarcula 2237 Archaea Archaea 52.8 0.019   NTclustered gi|1822681844|gb|CP050014.1| 2716717 g13706 i0 100 0.390697674418605 28 0 13 0 146 173 3206998 3207025 Haloarcula sp. JP-L23 chromosome, complete genome blastn 84 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula sp. JP-L23

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;