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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA839281" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA839281 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4657924 4657924 PRJNA839281_S_NODE_12864_length_223_cov_1.522989_g12595_i0 PRJNA839281 12864 223 1.522989 3.39626547 Bradybaena similaris 145626 Mollusca Mollusca 76.8 1.17e-9   NTclustered gi|2912997258|dbj|AP039602.1| 145626 g12595 i0 76.25 6.59641255605381 160 29 70 6 8 164 54112801 54112648 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 21, sequence blastn 1471 76.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
17807968 17807968 PRJNA839281_S_NODE_38694_length_157_cov_2.175926_g38425_i0 PRJNA839281 38694 157 2.175926 3.41620382 Metazoa 33208 Mollusca Mollusca 289 9.07e-74   NTclustered gi|1928112766|gb|MT947789.1| 6523 g38425 i0 100 99.3375796178344 156 0 99 0 1 156 59 214 Lymnaea stagnalis isolate Lsta_466444 hypothetical protein mRNA, complete cds blastn 15596 289 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
18681188 18681188 PRJNA839281_S_NODE_6795_length_313_cov_3.280303_g6526_i0 PRJNA839281 6795 313 3.280303 10.26734839 Mytilus californianus 6549 Mollusca Mollusca 56.5 0.002   NTclustered gi|2334608986|ref|XM_052206883.1| 6549 g6526 i0 94.444 0.115015974440895 36 2 12 0 111 146 2645 2610 PREDICTED: Mytilus californianus RING finger protein 11-like (LOC127702581), mRNA blastn 36 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
22907959 22907959 PRJNA839281_S_NODE_36378_length_161_cov_3.187500_g36109_i0 PRJNA839281 36378 161 3.1875 5.131875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 2.87e-4   NTclustered gi|2912987826|dbj|AP039592.1| 145626 g36109 i0 100 6.70807453416149 31 0 19 0 27 57 28635061 28635091 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 11, sequence blastn 1080 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
25457055 25457055 PRJNA839281_S_NODE_38100_length_161_cov_0.875000_g37831_i0 PRJNA839281 38100 161 0.875 1.40875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.001   NTclustered gi|1207979728|ref|XR_002461749.1| 6573 g37831 i0 100 37.1055900621118 30 0 36 0 40 69 453 482 PREDICTED: Mizuhopecten yessoensis actin, cytoplasmic-like (LOC110440549), misc_RNA blastn 5974 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;