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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA839281" and tax_clade = "Sar"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Sar · 11 ✖

bioproject 1

  • PRJNA839281 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2105170 2105170 PRJNA839281_S_NODE_2722_length_811_cov_2.914698_g2488_i0 PRJNA839281 2722 811 2.914698 23.63820078 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.023   NTclustered gi|916414171|ref|XM_013372863.1| 5802 g2488 i0 96.875 0.0394574599260173 32 1 4 0 186 217 1992 2023 Eimeria tenella uncharacterized protein (ETH_00030875), partial mRNA blastn 32 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
2505979 2505979 PRJNA839281_S_NODE_39242_length_153_cov_2.365385_g38973_i0 PRJNA839281 39242 153 2.365385 3.61903905 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.6e-11   NTclustered gi|239579434|gb|FJ438471.1| 4792 g38973 i0 81.633 4.6078431372549 98 18 64 0 54 151 466 563 Phytophthora nicotianae cyclophilin B (CyPB) gene, complete cds blastn 705 82.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
9757474 9757474 PRJNA839281_S_NODE_10308_length_247_cov_1.358586_g10039_i0 PRJNA839281 10308 247 1.358586 3.35570742 Aureococcus anophagefferens 44056 SAR_Eukaryotes SAR_Eukaryotes 195 3.51e-45   NTclustered gi|676390134|ref|XM_009040098.1| 44056 g10039 i0 81.328 72.825910931174107 241 43 97 2 8 247 705 944 Aureococcus anophagefferens hypothetical protein mRNA blastn 17988 195 1 Eukaryota Sar     Pelagophyceae Pelagomonadales Pelagomonadaceae Aureococcus Aureococcus anophagefferens
9757930 9757930 PRJNA839281_S_NODE_8028_length_282_cov_1.751073_g7759_i0 PRJNA839281 8028 282 1.751073 4.93802586 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 283 8.469999999999999e-72   NTclustered gi|2795052452|ref|XM_067926699.1| 4785 g7759 i0 92.424 68.354609929078 198 15 70 0 1 198 322 519 Phytophthora cinnamomi caltractin (IUM83_02754), partial mRNA blastn 19276 283 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
11033236 11033236 PRJNA839281_S_NODE_10349_length_246_cov_3.502538_g10080_i0 PRJNA839281 10349 246 3.502538 8.61624348 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 161 3.54e-35   NTclustered gi|2794916528|ref|XM_067893497.1| 164328 g10080 i0 79.821 63.6056910569106 223 43 90 2 1 222 265 44 Phytophthora ramorum 60S ribosomal protein L21-B (KRP23_8096), partial mRNA blastn 15647 161 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
11434097 11434097 PRJNA839281_S_NODE_18889_length_190_cov_1.446809_g18620_i0 PRJNA839281 18889 190 1.446809 2.7489371 Tintinnida 200604 SAR_Eukaryotes SAR_Eukaryotes 174 3.34e-39   NTclustered gi|23957291|gb|AF399167.1| 1513492 g18620 i0 83.158 97.8421052631579 190 32 100 0 1 190 509 320 Schmidingerella sp. LAK-2008 clone Fehr99atub_3 alpha-tubulin gene, partial cds blastn 18590 174 1 Eukaryota Sar   Ciliophora Spirotrichea Tintinnida Rhabdonellidae Schmidingerella Schmidingerella sp. LAK-2008
12308893 12308893 PRJNA839281_S_NODE_27190_length_167_cov_0.864407_g26921_i0 PRJNA839281 27190 167 0.864407 1.44355969 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 309 7.53e-80   NTclustered gi|166046671|emb|CU367781.1| 100861 g26921 i0 100 99.0479041916168 167 0 100 0 1 167 720 554 Aphanomyces euteiches cDNA blastn 16541 309 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
13984271 13984271 PRJNA839281_S_NODE_9391_length_259_cov_1.638095_g9122_i0 PRJNA839281 9391 259 1.638095 4.24266605 Saprolegnia 4769 SAR_Eukaryotes SAR_Eukaryotes 65.8 3.03e-6   NTclustered gi|813118109|ref|XM_012340462.1| 695850 g9122 i0 89.091 0.416988416988417 55 2 20 3 185 237 1334 1282 Saprolegnia parasitica CBS 223.65 hypothetical protein mRNA blastn 108 65.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
14857649 14857649 PRJNA839281_S_NODE_27272_length_167_cov_0.864407_g27003_i0 PRJNA839281 27272 167 0.864407 1.44355969 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 303 3.5e-78   NTclustered gi|209883104|ref|XM_002142938.1| 441375 g27003 i0 99.401 1 167 1 100 0 1 167 517 683 Cryptosporidium muris RN66 uncharacterized protein (CMU_004200), partial mRNA blastn 167 303 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
16533013 16533013 PRJNA839281_S_NODE_35233_length_162_cov_0.902655_g34964_i0 PRJNA839281 35233 162 0.902655 1.4623011 root 1 Root_unresolved Root_unresolved 294 2.03e-75   NTclustered gi|166046587|emb|CU367704.1| 100861 g34964 i0 99.383 34.6358024691358 162 1 100 0 1 162 392 553 Aphanomyces euteiches cDNA blastn 5611 294 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
18681136 18681136 PRJNA839281_S_NODE_4095_length_487_cov_3.826484_g3827_i0 PRJNA839281 4095 487 3.826484 18.63497708 Hyaloperonospora parasitica 123356 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.013   NTclustered gi|170285697|emb|CU672270.3| 123356 g3827 i0 100 0.0595482546201232 29 0 6 0 287 315 1789 1761 H.parasitica DNA sequence from clone HpEmoy2-20J10, complete sequence blastn 29 54.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Hyaloperonospora Hyaloperonospora parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;