RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA835051" and tax_phylum = "Nanobdellota"

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tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA835051 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23779095 23779095 PRJNA835051_S_NODE_9819_length_327_cov_1.637324_g9523_i0 PRJNA835051 9819 327 1.637324 5.35404948 Candidatus Nanopusillus acidilobi 1577684 Archaea Archaea 52.8 0.031   NTclustered gi|985630447|gb|CP010514.1| 1577684 g9523 i0 100 0.0856269113149847 28 0 9 0 140 167 237711 237684 Candidatus Nanopusillus acidilobi strain 7A chromosome, complete genome blastn 28 52.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia Nanoarchaeales Nanopusillaceae Candidatus Nanopusillus Candidatus Nanopusillus acidilobi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;