RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA835051" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA835051 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13983383 13983383 PRJNA835051_S_NODE_51751_length_214_cov_2.701754_g51455_i0 PRJNA835051 51751 214 2.701754 5.78175356 Methanosarcina 2207 Archaea Archaea 52.8 0.019   NTclustered gi|2515741548|gb|CP117271.1| 2209 g51455 i0 88.636 2.67289719626168 44 3 21 1 48 91 465414 465373 Mutant Methanosarcina mazei strain Mm Mut 208, complete genome blastn 572 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
19952085 19952085 PRJNA835051_S_NODE_133956_length_150_cov_0.887850_g133660_i0 PRJNA835051 133956 150 0.88785 1.331775 Natrialba magadii 13769 Archaea Archaea 63.9 5.64e-6   NTclustered gi|289529249|gb|CP001932.1| 547559 g133660 i0 100 51.5533333333333 34 0 23 0 45 78 3095408 3095375 Natrialba magadii ATCC 43099, complete sequence blastn 7733 63.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natrialba Natrialba magadii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;