RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA833575" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA833575 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
824548 824548 PRJNA833575_P_NODE_43201_length_230_cov_0.894410_g43064_i0 PRJNA833575 43201 230 0.89441 2.057143 Hydra vulgaris 6087 Cnidaria other_Eukaryota 176 1.17e-39   NTclustered gi|2744799589|ref|XM_004205495.4| 6087 g43064 i0 80.519 92.8695652173913 231 43 100 2 1 230 882 653 PREDICTED: Hydra vulgaris polyubiquitin-B (LOC100203041), mRNA blastn 21360 176 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
5927589 5927589 PRJNA833575_P_NODE_38985_length_234_cov_1.418182_g38848_i0 PRJNA833575 38985 234 1.418182 3.31854588 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 178 3.31e-40   NTclustered gi|2729078822|ref|XM_065201785.1| 499914 g38848 i0 80.426 78.4230769230769 235 44 100 2 1 234 832 599 PREDICTED: Rhopilema esculentum polyubiquitin-C (LOC135685733), mRNA blastn 18351 178 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
21630845 21630845 PRJNA833575_P_NODE_24857_length_298_cov_1.689956_g24720_i0 PRJNA833575 24857 298 1.689956 5.03606888 Pocillopora 46730 Cnidaria other_Eukaryota 156 2.05e-33   NTclustered gi|1524901147|ref|XM_027203078.1| 46731 g24720 i0 79.464 5.85234899328859 224 42 74 4 26 247 365 144 PREDICTED: Pocillopora damicornis ADP-ribosylation factor 4 (LOC113685554), mRNA blastn 1744 156 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;