RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA833575" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA833575 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5927395 5927395 PRJNA833575_P_NODE_26065_length_292_cov_0.914798_g25928_i0 PRJNA833575 26065 292 0.914798 2.6712101599999998 Gloeophyllum sepiarium 40444 Fungi Fungi 339 1.86e-88   NTclustered gi|34915795|emb|AJ583432.1| 40444 g25928 i0 87.713 92.8835616438356 293 32 100 4 1 292 3235 2946 Gloeophyllum sepiarium 28S rRNA gene, isolate P198 blastn 27122 339 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Gloeophyllales Gloeophyllaceae Gloeophyllum Gloeophyllum sepiarium
7202293 7202293 PRJNA833575_P_NODE_12926_length_404_cov_1.719403_g12789_i0 PRJNA833575 12926 404 1.719403 6.94638812 Kwoniella shandongensis 1734106 Fungi Fungi 189 2.8299999999999998e-43   NTclustered gi|1799713775|ref|XM_032003036.1| 1734106 g12789 i0 83.495 41.6683168316832 206 30 50 4 18 221 24 227 Kwoniella shandongensis 60S ribosomal protein uL15 (CI109_100300), partial mRNA blastn 16834 189 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella shandongensis
8477217 8477217 PRJNA833575_P_NODE_32747_length_259_cov_1.468421_g32610_i0 PRJNA833575 32747 259 1.468421 3.80321039 Rhodotorula graminis 29898 Fungi Fungi 52.8 0.024   NTclustered gi|1069917442|ref|XM_018413066.1| 578459 g32610 i0 91.892 0.142857142857143 37 3 14 0 2 38 639 675 Rhodotorula graminis WP1 uncharacterized protein (RHOBADRAFT_32945), partial mRNA blastn 37 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula graminis
12303583 12303583 PRJNA833575_P_NODE_34030_length_253_cov_1.826087_g33893_i0 PRJNA833575 34030 253 1.826087 4.62000011 Epithele typhae 378194 Fungi Fungi 122 1.73e-23   NTclustered gi|2234710531|ref|XM_048018404.1| 378194 g33893 i0 81.879 12.9209486166008 149 23 58 4 20 166 192 46 Epithele typhae mitochondrial carrier (BXZ73DRAFT_39567), partial mRNA blastn 3269 122 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Epitheliaceae Epithele Epithele typhae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;