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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA833575" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 30 ✖

bioproject 1

  • PRJNA833575 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5927457 5927457 PRJNA833575_P_NODE_29665_length_273_cov_1.205882_g29528_i0 PRJNA833575 29665 273 1.205882 3.29205786 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 329 1.0299999999999998e-85   NTclustered gi|496405657|gb|JX399872.1| 1144522 g29528 i0 92.576 9.46520146520147 229 17 84 0 1 229 1096 1324 Tritrichomonas foetus clone TTF_00003 beta-tubulin gene, complete cds blastn 2584 329 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
5927754 5927754 PRJNA833575_P_NODE_4965_length_631_cov_1.779359_g4831_i0 PRJNA833575 4965 631 1.779359 11.22775529 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 641 2.92e-179   NTclustered gi|2806481380|ref|XM_068495228.1| 1144522 g4831 i0 86.473 22.635499207607 584 78 93 1 1 584 1236 654 Tritrichomonas foetus Elongation factor 1-alpha 2 (TRFO_10078), partial mRNA blastn 14283 641 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
7202537 7202537 PRJNA833575_P_NODE_29026_length_276_cov_1.391304_g28889_i0 PRJNA833575 29026 276 1.391304 3.83999904 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 180 1.1199999999999999e-40   NTclustered gi|2806437535|ref|XM_068489767.1| 1144522 g28889 i0 80.252 0.86231884057971 238 47 86 0 39 276 257 20 Tritrichomonas foetus ribosomal protein S13p/S18e (TRFO_00870), partial mRNA blastn 238 180 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
7202902 7202902 PRJNA833575_P_NODE_7506_length_520_cov_2.356984_g7369_i0 PRJNA833575 7506 520 2.356984 12.2563168 Tritrichomonas musculus 1915356 Parabasalia other_Eukaryota 536 1.15e-147   NTclustered gi|1100877169|gb|KX492913.1| 1915356 g7369 i0 95.266 47.8288461538462 338 16 65 0 1 338 2 339 Tritrichomonas musculus glyceraldehyde 3-phosphate dehydrogenase gene, partial cds blastn 24871 536 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas musculus
8477066 8477066 PRJNA833575_P_NODE_24107_length_303_cov_1.230769_g23970_i0 PRJNA833575 24107 303 1.230769 3.72923007 Tritrichomonas muris 5726 Parabasalia other_Eukaryota 555 1.7599999999999995e-153   NTclustered gi|62466089|gb|AY886846.1| 5726 g23970 i0 99.67 100.712871287129 303 1 100 0 1 303 327 25 Tritrichomonas muris clone 1-6 16S-like ribosomal RNA gene, partial sequence blastn 30516 555 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas muris
8882059 8882059 PRJNA833575_P_NODE_31667_length_264_cov_1.107692_g31530_i0 PRJNA833575 31667 264 1.107692 2.92430688 Tritrichomonadida 740972 Parabasalia other_Eukaryota 241 4.8e-59   NTclustered gi|2794860269|ref|XM_067916733.1| 135588 g31530 i0 83.594 2.81818181818182 256 42 97 0 1 256 579 834 Histomonas meleagridis Alpha amylase, catalytic domain containing protein (GO595_000369), partial mRNA blastn 744 241 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
9752120 9752120 PRJNA833575_P_NODE_14048_length_389_cov_1.737500_g13911_i0 PRJNA833575 14048 389 1.7375 6.758875 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 429 1.4699999999999999e-115   NTclustered gi|2806461464|ref|XM_068504632.1| 1144522 g13911 i0 86.667 8.34190231362468 390 48 99 4 1 388 1090 703 Tritrichomonas foetus Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal (TRFO_25896), partial mRNA blastn 3245 429 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
9752447 9752447 PRJNA833575_P_NODE_36588_length_242_cov_1.248555_g36451_i0 PRJNA833575 36588 242 1.248555 3.0215031 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 158 4.49e-34   NTclustered gi|2806487076|ref|XM_068496270.1| 1144522 g36451 i0 79.817 0.900826446280992 218 42 90 2 24 240 421 205 Tritrichomonas foetus ribosomal protein L18ae (TRFO_11848), partial mRNA blastn 218 158 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
11028064 11028064 PRJNA833575_P_NODE_29209_length_275_cov_1.398058_g29072_i0 PRJNA833575 29209 275 1.398058 3.8446595 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 300 8.170000000000001e-77   NTclustered gi|2806478199|ref|XM_068494771.1| 1144522 g29072 i0 86.182 72.8363636363636 275 38 100 0 1 275 287 13 Tritrichomonas foetus Elongation factor 1-alpha (TRFO_09265), partial mRNA blastn 20030 300 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
13577863 13577863 PRJNA833575_P_NODE_30691_length_268_cov_1.447236_g30554_i0 PRJNA833575 30691 268 1.447236 3.87859248 Monocercomonas colubrorum 135485 Parabasalia other_Eukaryota 169 2.34e-37   NTclustered gi|9965349|gb|AF288748.1|AF288748 135485 g30554 i0 82 0.992537313432836 200 34 74 2 5 203 808 610 Monocercomonas colubrorum putative cytosolic malate dehydrogenase (MDH) mRNA, partial cds blastn 266 169 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Monocercomonadidae Monocercomonas Monocercomonas colubrorum
14852442 14852442 PRJNA833575_P_NODE_37452_length_238_cov_1.396450_g37315_i0 PRJNA833575 37452 238 1.39645 3.323551 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 307 4.13e-79   NTclustered gi|2806443473|ref|XM_068497917.1| 1144522 g37315 i0 89.916 1 238 24 100 0 1 238 22 259 Tritrichomonas foetus 60S ribosomal protein L37a (TRFO_14616), partial mRNA blastn 238 307 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
16126772 16126772 PRJNA833575_P_NODE_21053_length_322_cov_1.620553_g20916_i0 PRJNA833575 21053 322 1.620553 5.21818066 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 200 1.02e-46   NTclustered gi|2806473255|ref|XM_068508867.1| 1144522 g20916 i0 78.593 1.74223602484472 327 53 99 12 1 320 5 321 Tritrichomonas foetus 60S acidic ribosomal protein P1 (TRFO_33076), partial mRNA blastn 561 200 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
16126910 16126910 PRJNA833575_P_NODE_30213_length_270_cov_2.149254_g30076_i0 PRJNA833575 30213 270 2.149254 5.8029858 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 226 1.38e-54   NTclustered gi|2794862924|ref|XM_067914518.1| 135588 g30076 i0 83.471 3.65185185185185 242 40 90 0 1 242 2845 3086 Histomonas meleagridis pyruvate:ferredoxin (flavodoxin) oxidoreductase (GO595_001692), partial mRNA blastn 986 226 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
17402592 17402592 PRJNA833575_P_NODE_27894_length_282_cov_1.014085_g27757_i0 PRJNA833575 27894 282 1.014085 2.8597197 Monocercomonas sp. ATCC 50210 235483 Parabasalia other_Eukaryota 372 1.76e-98   NTclustered gi|33465452|gb|AY277791.1| 235483 g27757 i0 90.426 76.1524822695036 282 27 100 0 1 282 945 664 Monocercomonas sp. ATCC 50210 beta-tubulin 2 gene, partial cds blastn 21475 372 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Monocercomonadidae Monocercomonas Monocercomonas sp. ATCC 50210
18675663 18675663 PRJNA833575_P_NODE_30895_length_267_cov_1.454545_g30758_i0 PRJNA833575 30895 267 1.454545 3.88363515 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 202 2.29e-47   NTclustered gi|2511551|gb|AF022415.1| 1144522 g30758 i0 80.608 1.97003745318352 263 49 98 2 6 267 336 75 Tritrichomonas foetus glyceraldehyde-3-phosphate dehydrogenase (gap1) gene, partial cds blastn 526 202 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
18675856 18675856 PRJNA833575_P_NODE_42695_length_230_cov_0.894410_g42558_i0 PRJNA833575 42695 230 0.89441 2.057143 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 174 4.2e-39   NTclustered gi|2806455146|ref|XM_068502202.1| 1144522 g42558 i0 81.308 4.57826086956522 214 40 93 0 17 230 339 126 Tritrichomonas foetus Malate dehydrogenase (TRFO_21817), partial mRNA blastn 1053 174 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19950629 19950629 PRJNA833575_P_NODE_20756_length_324_cov_1.968627_g20619_i0 PRJNA833575 20756 324 1.968627 6.37835148 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 348 3.47e-91   NTclustered gi|2806484750|ref|XM_068512530.1| 1144522 g20619 i0 86.25 3.28703703703704 320 44 99 0 4 323 860 541 Tritrichomonas foetus enolase family protein (TRFO_39253), partial mRNA blastn 1065 348 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19950747 19950747 PRJNA833575_P_NODE_28056_length_281_cov_1.349057_g27919_i0 PRJNA833575 28056 281 1.349057 3.79085017 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 276 1.41e-69   NTclustered gi|2806472639|ref|XM_068493954.1| 1144522 g27919 i0 85.606 5.49466192170819 264 36 94 2 9 271 814 1076 Tritrichomonas foetus adhesin AP65-1 precursor (TRFO_07867), partial mRNA blastn 1544 276 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19950754 19950754 PRJNA833575_P_NODE_28576_length_279_cov_0.804762_g28439_i0 PRJNA833575 28576 279 0.804762 2.24528598 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 398 2.8599999999999996e-106   NTclustered gi|33465442|gb|AY277786.1| 1144522 g28439 i0 92.727 20.0824372759857 275 20 99 0 1 275 182 456 Tritrichomonas foetus strain ATCC 30924 beta-tubulin 1 gene, partial cds blastn 5603 398 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19950758 19950758 PRJNA833575_P_NODE_28756_length_278_cov_0.947368_g28619_i0 PRJNA833575 28756 278 0.947368 2.63368304 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 302 2.3e-77   NTclustered gi|2806447526|ref|XM_068499246.1| 1144522 g28619 i0 86.496 3.63669064748201 274 37 99 0 5 278 402 129 Tritrichomonas foetus Ubiquitin-40S ribosomal protein S27a (ubi3), partial mRNA blastn 1011 302 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
19950860 19950860 PRJNA833575_P_NODE_35556_length_247_cov_1.202247_g35419_i0 PRJNA833575 35556 247 1.202247 2.96955009 Tritrichomonas sp. 2185286 Parabasalia other_Eukaryota 289 1.56e-73   NTclustered gi|1800457944|gb|MN985504.1| 2185286 g35419 i0 87.805 1.15384615384615 246 30 99 0 1 246 602 847 Tritrichomonas sp. strain LL5 blastn 285 289 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas sp.
21226218 21226218 PRJNA833575_P_NODE_19777_length_332_cov_1.095057_g19640_i0 PRJNA833575 19777 332 1.095057 3.63558924 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 342 1.66e-89   NTclustered gi|2806451842|ref|XM_068500865.1| 1144522 g19640 i0 87.171 0.91566265060241 304 35 91 4 24 325 40 341 Tritrichomonas foetus 40S ribosomal protein S4, X isoform (Rps4x), partial mRNA blastn 304 342 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
21226358 21226358 PRJNA833575_P_NODE_2897_length_802_cov_3.485675_g2790_i0 PRJNA833575 2897 802 3.485675 27.9551135 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 1133 0   NTclustered gi|2806483296|ref|XM_068490526.1| 1144522 g2790 i0 92.73 74.784289276808 784 57 98 0 1 784 345 1128 Tritrichomonas foetus actin (TRFO_02171), partial mRNA blastn 59977 1133 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
22500845 22500845 PRJNA833575_P_NODE_14498_length_384_cov_0.873016_g14361_i0 PRJNA833575 14498 384 0.873016 3.35238144 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 342 1.94e-89   NTclustered gi|2794873798|ref|XM_067919267.1| 135588 g14361 i0 82.812 1.99479166666667 384 64 99 2 2 384 76 458 Histomonas meleagridis Archaeal ribosomal protein S17P (GO595_005967), partial mRNA blastn 766 342 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
22501242 22501242 PRJNA833575_P_NODE_37418_length_238_cov_1.704142_g37281_i0 PRJNA833575 37418 238 1.704142 4.05585796 Monocercomonas sp. ATCC 50210 235483 Parabasalia other_Eukaryota 315 2.47e-81   NTclustered gi|1755089|gb|U66903.1|MSU66903 235483 g37281 i0 90.678 98.2941176470588 236 22 99 0 3 238 1122 887 Monocercomonas ATCC50210 alpha-tubulin (atub2) gene, partial cds blastn 23394 315 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Monocercomonadidae Monocercomonas Monocercomonas sp. ATCC 50210
22501271 22501271 PRJNA833575_P_NODE_39118_length_234_cov_1.018182_g38981_i0 PRJNA833575 39118 234 1.018182 2.38254588 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 215 2.53e-51   NTclustered gi|2806472327|ref|XM_068508527.1| 1144522 g38981 i0 83.7 0.97008547008547 227 37 97 0 2 228 284 58 Tritrichomonas foetus ribosomal protein L22 (TRFO_32485), partial mRNA blastn 227 215 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23776672 23776672 PRJNA833575_P_NODE_27199_length_285_cov_2.305556_g27062_i0 PRJNA833575 27199 285 2.305556 6.5708346 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 324 5.05e-84   NTclustered gi|2806444183|ref|XM_068498062.1| 1144522 g27062 i0 87.018 6.65964912280702 285 34 99 3 1 284 255 537 Tritrichomonas foetus ribosomal protein (TRFO_14862), partial mRNA blastn 1898 324 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
23776696 23776696 PRJNA833575_P_NODE_28559_length_279_cov_0.995238_g28422_i0 PRJNA833575 28559 279 0.995238 2.77671402 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 313 1.07e-80   NTclustered gi|2806448290|ref|XM_068499533.1| 1144522 g28422 i0 87.004 14.6129032258065 277 36 99 0 3 279 133 409 Tritrichomonas foetus Peptidyl-prolyl cis-trans isomerase 3 (TRFO_17352), partial mRNA blastn 4077 313 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
25050311 25050311 PRJNA833575_P_NODE_1080_length_1215_cov_1.468586_g1024_i0 PRJNA833575 1080 1215 1.468586 17.8433199 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 824 0   NTclustered gi|2806463802|ref|XM_068505514.1| 1144522 g1024 i0 79.727 20.8609053497942 1174 210 96 25 36 1198 851 2007 Tritrichomonas foetus Alpha-galactosidase (TRFO_27390), partial mRNA blastn 25346 824 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
25050482 25050482 PRJNA833575_P_NODE_23940_length_304_cov_1.225532_g23803_i0 PRJNA833575 23940 304 1.225532 3.72561728 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 340 5.4e-89   NTclustered gi|2806482022|ref|XM_068495352.1| 1144522 g23803 i0 87.248 5.34868421052632 298 38 98 0 1 298 20 317 Tritrichomonas foetus 40S ribosomal protein S17-B (TRFO_10277), partial mRNA blastn 1626 340 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;