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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA832865" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA832865 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5925245 5925245 PRJNA832865_S_NODE_101145_length_247_cov_0.885057_g96059_i0 PRJNA832865 101145 247 0.885057 2.18609079 Methanosarcina sp. MTP4 1434100 Archaea Archaea 52.8 0.022   NTclustered gi|805342629|gb|CP009505.1| 1434100 g96059 i0 100 0.11336032388664 28 0 11 0 15 42 1786294 1786267 Methanosarcina sp. MTP4, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
12302245 12302245 PRJNA832865_S_NODE_38690_length_430_cov_2.394958_g33605_i0 PRJNA832865 38690 430 2.394958 10.2983194 Nitrosotalea devaniterrae 1078905 Archaea Archaea 52.8 0.041   NTclustered gi|1003583480|emb|LN890280.1| 1078905 g33605 i0 94.118 0.0790697674418605 34 2 8 0 260 293 996827 996860 Candidatus Nitrosotalea devanaterra genome assembly, chromosome: 1 blastn 34 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Nitrosotalea devaniterrae
12302569 12302569 PRJNA832865_S_NODE_55950_length_335_cov_0.881679_g50864_i0 PRJNA832865 55950 335 0.881679 2.95362465 uncultured archaeon 115547 Archaea Archaea 54.7 0.009   NTclustered gi|1591441181|gb|MK005738.1| 115547 g50864 i0 96.875 0.0955223880597015 32 1 10 0 238 269 11540 11571 Uncultured archaeon clone rifcsplowo2_01_282_cur blastn 32 54.7 1 Archaea               uncultured archaeon
24180259 24180259 PRJNA832865_S_NODE_40439_length_416_cov_1.411079_g35354_i0 PRJNA832865 40439 416 1.411079 5.87008864 Archaea 2157 Archaea Archaea 54.7 0.011   NTclustered gi|765560211|gb|KP308712.1| 115547 g35354 i0 100 0.209134615384615 29 0 7 0 285 313 184681 184653 Uncultured archaeon clone gwa2_scaffold_75 genomic sequence blastn 87 54.7 1 Archaea               uncultured archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;