RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA832865" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA832865 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12303096 12303096 PRJNA832865_S_NODE_90930_length_256_cov_0.879781_g85844_i0 PRJNA832865 90930 256 0.879781 2.25223936 Dysidea avara 196820 Porifera other_Eukaryota 52.8 0.023   NTclustered gi|2749561033|ref|XR_010700655.1| 196820 g85844 i0 100 0.109375 28 0 11 0 155 182 2601 2628 PREDICTED: Dysidea avara uncharacterized lncRNA (LOC136254667), ncRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
22906190 22906190 PRJNA832865_S_NODE_39298_length_425_cov_2.460227_g34213_i0 PRJNA832865 39298 425 2.460227 10.45596475 Spongiidae 119429 Porifera other_Eukaryota 52.8 0.041   NTclustered gi|2795783576|emb|OZ174364.1| 476028 g34213 i0 100 0.131764705882353 28 0 7 0 369 396 13308 13335 Rhopaloeides odorabile genome assembly, organelle: mitochondrion blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Spongiidae Rhopaloeides Rhopaloeides odorabile
23775964 23775964 PRJNA832865_S_NODE_66839_length_302_cov_2.393013_g61753_i0 PRJNA832865 66839 302 2.393013 7.22689926 Sycon ciliatum 27933 Porifera other_Eukaryota 52.8 0.028   NTclustered gi|2732901653|ref|XM_065338769.1| 27933 g61753 i0 100 0.0927152317880795 28 0 9 0 259 286 62 35 PREDICTED: Sycon ciliatum uncharacterized LOC135826127 (LOC135826127), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;