RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA832865" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA832865 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8476022 8476022 PRJNA832865_S_NODE_43687_length_393_cov_1.484375_g38601_i0 PRJNA832865 43687 393 1.484375 5.83359375 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 56.5 0.003   NTclustered gi|687625576|emb|LK429870.1| 57078 g38601 i0 100 0.0763358778625954 30 0 8 0 126 155 1895 1924 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0035560 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
8476789 8476789 PRJNA832865_S_NODE_92267_length_254_cov_0.856354_g87181_i0 PRJNA832865 92267 254 0.856354 2.17513916 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.023   NTclustered gi|687759254|emb|LK799307.1| 57078 g87181 i0 100 0.110236220472441 28 0 11 0 217 244 519 546 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0362232 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
11026452 11026452 PRJNA832865_S_NODE_24389_length_647_cov_2.043554_g19456_i0 PRJNA832865 24389 647 2.043554 13.22179438 Castrella pinguis 1311880 Platyhelminthes Platyhelminthes 230 2.769999999999999e-55   NTclustered gi|588313822|gb|KC869780.1| 1311880 g19456 i0 76.888 30.5780525502318 437 81 66 17 167 594 14 439 Castrella pinguis 16S ribosomal RNA gene, partial sequence; mitochondrial blastn 19784 230 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Dalyelliidae Castrella Castrella pinguis
13577303 13577303 PRJNA832865_S_NODE_81331_length_272_cov_1.396985_g76245_i0 PRJNA832865 81331 272 1.396985 3.7997992 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 54.7 0.007   NTclustered gi|225542995|emb|FN293034.1| 6182 g76245 i0 96.875 0.117647058823529 32 1 12 0 176 207 70075 70044 Schistosoma japonicum isolate Anhui clone BAC C108_92H08, complete sequence blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
14851204 14851204 PRJNA832865_S_NODE_45812_length_380_cov_1.429967_g40726_i0 PRJNA832865 45812 380 1.429967 5.4338746 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.036   NTclustered gi|687186941|emb|LN165699.1| 99802 g40726 i0 96.774 0.0815789473684211 31 1 8 0 107 137 29 59 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0147763 blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
16126568 16126568 PRJNA832865_S_NODE_97133_length_249_cov_1.255682_g92047_i0 PRJNA832865 97133 249 1.255682 3.12664818 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 63.9 1.04e-5   NTclustered gi|687163771|emb|LN041354.1| 99802 g92047 i0 84.615 0.261044176706827 65 9 26 1 137 200 6316 6252 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0040372 blastn 65 63.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;