RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA832865" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA832865 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
822985 822985 PRJNA832865_S_NODE_34021_length_479_cov_1.219212_g28941_i0 PRJNA832865 34021 479 1.219212 5.84002548 Phycomyces blakesleeanus 4837 Fungi Fungi 52.8 0.047   NTclustered gi|1069943474|ref|XM_018440677.1| 763407 g28941 i0 100 0.058455114822547 28 0 6 0 102 129 1342 1315 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
3373959 3373959 PRJNA832865_S_NODE_43803_length_392_cov_1.962382_g38717_i0 PRJNA832865 43803 392 1.962382 7.69253744 Lobosporangium transversale 64571 Fungi Fungi 52.8 0.037   NTclustered gi|1227149312|ref|XM_022019954.1| 64571 g38717 i0 100 0.0714285714285714 28 0 7 0 253 280 1386 1413 Lobosporangium transversale hypothetical protein (BCR41DRAFT_209947), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
23774604 23774604 PRJNA832865_S_NODE_110759_length_241_cov_0.916667_g105673_i0 PRJNA832865 110759 241 0.916667 2.20916747 Rhizomucor pusillus 4840 Fungi Fungi 126 1.26e-24   NTclustered gi|2837753634|ref|XM_069381467.1| 4840 g105673 i0 84.375 6.31120331950207 128 20 53 0 39 166 574 701 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_2950), partial mRNA blastn 1521 126 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
23775754 23775754 PRJNA832865_S_NODE_54879_length_338_cov_3.154717_g49793_i0 PRJNA832865 54879 338 3.154717 10.66294346 Rhizophagus irregularis 588596 Fungi Fungi 56.5 0.002   NTclustered gi|2749791574|ref|XM_025327744.2| 588596 g49793 i0 100 0.20414201183432 30 0 9 0 95 124 1711 1740 Rhizophagus irregularis uncharacterized protein (OCT59_028753), partial mRNA blastn 69 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;