RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA832865" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA832865 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2099446 2099446 PRJNA832865_S_NODE_94402_length_251_cov_0.865169_g89316_i0 PRJNA832865 94402 251 0.865169 2.17157419 Polyomavirus myotis5169 3117250 Viruses Viruses 52.8 0.023   NTclustered gi|2710391313|tpg|BK066489.1| 3117250 g89316 i0 100 0.111553784860558 28 0 11 0 49 76 405 432 MAG TPA_asm: Polyomavirus myotis5169 isolate Polyoma5169 genomic sequence blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae   Polyomavirus myotis5169
8881748 8881748 PRJNA832865_S_NODE_90607_length_256_cov_1.464481_g85521_i0 PRJNA832865 90607 256 1.464481 3.74907136 Begomovirus 10814 Viruses Viruses 473 4.189999999999999e-129   NTclustered gi|2636060190|dbj|LC790473.1| 10832 g85521 i0 100 100 256 0 100 0 1 256 521 266 Tomato yellow leaf curl virus Kanagawa3 DNA, complete genome blastn 25600 473 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Geminiviridae Begomovirus Begomovirus coheni
9751130 9751130 PRJNA832865_S_NODE_40908_length_412_cov_4.787611_g35823_i0 PRJNA832865 40908 412 4.787611 19.72495732 Nanoviridae sp. 2723992 Viruses Viruses 52.8 0.04   NTclustered gi|2302015506|gb|MT203386.1| 2723992 g35823 i0 96.875 0.0776699029126214 32 0 8 1 338 368 198 229 MAG: Nanoviridae sp. isolate CN8_L15_4547, complete genome blastn 32 52.8 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Mulpavirales Nanoviridae   Nanoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;