RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA832865" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA832865 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
823172 823172 PRJNA832865_S_NODE_42481_length_401_cov_2.314024_g37395_i0 PRJNA832865 42481 401 2.314024 9.27923624 Rheavirus sinusmexicani 3047716 Viruses Viruses 58.4 8.26e-4   NTclustered gi|310830989|ref|NC_014637.1| 693272 g37395 i0 88 0.124688279301746 50 5 12 1 285 334 113263 113215 Cafeteria roenbergensis virus BV-PW1, complete genome blastn 50 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Rheavirus Rheavirus sinusmexicani
9750752 9750752 PRJNA832865_S_NODE_24988_length_633_cov_1.641071_g20034_i0 PRJNA832865 24988 633 1.641071 10.38797943 Cotonvirus japonicum 3059904 Viruses Viruses 56.5 0.005   NTclustered gi|2500766720|ref|NC_079139.1| 2811091 g20034 i0 100 0.0473933649289099 30 0 5 0 551 580 1303349 1303378 Cotonvirus japonicus DNA, complete genome blastn 30 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Cotonvirus Cotonvirus japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;