RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA827593" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA827593 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
820943 820943 PRJNA827593_P_NODE_21081_length_462_cov_1.452442_g20783_i0 PRJNA827593 21081 462 1.452442 6.71028204 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 141 9.31e-29   NTclustered gi|2874253986|emb|OY970311.1| 3107663 g20783 i0 96.512 17.8290043290043 86 2 18 1 1 85 3078795 3078710 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.13 genome assembly, chromosome: 1 blastn 8237 141 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
2096366 2096366 PRJNA827593_P_NODE_18282_length_501_cov_1.528037_g17984_i0 PRJNA827593 18282 501 1.528037 7.65546537 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 342 2.5899999999999998e-89   NTclustered gi|2874253986|emb|OY970311.1| 3107663 g17984 i0 83.069 4.16367265469062 378 62 75 2 1 377 1779764 1779388 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.13 genome assembly, chromosome: 1 blastn 2086 342 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
25047074 25047074 PRJNA827593_P_NODE_13840_length_584_cov_2.381605_g13545_i0 PRJNA827593 13840 584 2.381605 13.9085732 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 457 1.05e-123   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g13545 i0 84.922 2.36815068493151 451 68 77 0 88 538 2835459 2835009 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 1383 457 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;