RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA827593" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA827593 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2097302 2097302 PRJNA827593_P_NODE_8922_length_744_cov_4.263785_g8636_i0 PRJNA827593 8922 744 4.263785 31.7225604 Chemarfal virus 260 3063286 Viruses Viruses 582 2.1399999999999998e-161   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g8636 i0 94.906 3.09408602150538 373 18 50 1 359 730 1431 1059 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 2302 582 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
4649763 4649763 PRJNA827593_P_NODE_48584_length_287_cov_3.261682_g48285_i0 PRJNA827593 48584 287 3.261682 9.36102734 Fabavirus betaviciae 3047702 Viruses Viruses 189 1.94e-43   NTclustered gi|745788247|gb|KJ789137.1| 76875 g48285 i0 79.787 84.7979094076655 282 40 97 9 1 277 3302 3571 Broad bean wilt virus 2 isolate SG1 segment RNA2, complete sequence blastn 24337 189 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus betaviciae
5924136 5924136 PRJNA827593_P_NODE_2305_length_1553_cov_2.058108_g2126_i0 PRJNA827593 2305 1553 2.058108 31.96241724 Totivirus sp. 2776824 Viruses Viruses 549 4.639999999999999e-151   NTclustered gi|1918615619|gb|MT949668.1| 2776824 g2126 i0 79.841 0.48551191242756 754 150 48 2 182 934 753 1 Totivirus sp. isolate sequence_10295 genomic sequence blastn 754 549 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus sp.
8474690 8474690 PRJNA827593_P_NODE_8747_length_753_cov_2.357353_g8462_i0 PRJNA827593 8747 753 2.357353 17.75086809 Wufeng shrew picorna-like virus 22 3084072 Viruses Viruses 854 0   NTclustered gi|2633074317|gb|OQ716179.1| 3084072 g8462 i0 87.282 0.99203187250996006 747 95 99 0 1 747 8834 8088 MAG: Wufeng shrew picorna-like virus 22 isolate WF_Ch.smithii_picorna-like_22 RNA-dependent RNA polymerase, hypothetical protein, and capsid protein genes, complete cds blastn 747 854 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wufeng shrew picorna-like virus 22
13574327 13574327 PRJNA827593_P_NODE_15331_length_552_cov_2.066806_g15035_i0 PRJNA827593 15331 552 2.066806 11.40876912 Wufeng shrew picorna-like virus 22 3084072 Viruses Viruses 571 3.369999999999999e-158   NTclustered gi|2633074317|gb|OQ716179.1| 3084072 g15035 i0 85.714 0.989130434782609 546 73 98 5 10 551 9198 9742 MAG: Wufeng shrew picorna-like virus 22 isolate WF_Ch.smithii_picorna-like_22 RNA-dependent RNA polymerase, hypothetical protein, and capsid protein genes, complete cds blastn 546 571 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wufeng shrew picorna-like virus 22
16123464 16123464 PRJNA827593_P_NODE_19533_length_482_cov_2.007335_g19235_i0 PRJNA827593 19533 482 2.007335 9.6753547 Wufeng shrew picorna-like virus 22 3084072 Viruses Viruses 745 0   NTclustered gi|2633074314|gb|OQ716178.1| 3084072 g19235 i0 95.87 1.90871369294606 460 19 95 0 23 482 2934 3393 MAG: Wufeng shrew picorna-like virus 22 isolate JM_Mi.schreibersii_picorna-like_6 RNA-dependent RNA polymerase gene, partial cds; and hypothetical protein gene, complete cds blastn 920 745 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wufeng shrew picorna-like virus 22

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;