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contig_metadata

25 rows where analysis = "blastn", bioproject = "PRJNA827593" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 25 ✖

bioproject 1

  • PRJNA827593 · 25 ✖

analysis 1

  • blastn · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
821203 821203 PRJNA827593_P_NODE_35421_length_344_cov_1.623616_g35122_i0 PRJNA827593 35421 344 1.623616 5.58523904 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 217 1.09e-51   NTclustered gi|542687346|ref|NC_022178.1| 1202772 g35122 i0 82.52 4.61627906976744 246 43 72 0 2 247 46499 46744 Achlya hypogyna mitochondrion, complete genome blastn 1588 217 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
2097108 2097108 PRJNA827593_P_NODE_60962_length_251_cov_1.713483_g60663_i0 PRJNA827593 60962 251 1.713483 4.30084233 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.89e-4   NTclustered gi|698779808|ref|XM_009824646.1| 112090 g60663 i0 97.059 0.135458167330677 34 1 14 0 198 231 578 545 Aphanomyces astaci hypothetical protein mRNA blastn 34 58.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
2097266 2097266 PRJNA827593_P_NODE_7302_length_828_cov_4.384106_g7033_i0 PRJNA827593 7302 828 4.384106 36.30039768 Ochromonas sp. SAG 933.10 984272 SAR_Eukaryotes SAR_Eukaryotes 1308 0   NTclustered gi|323690578|gb|GU935637.1| 984272 g7033 i0 95.198 89.2838164251208 833 31 100 7 1 828 1193 2021 Ochromonas sp. SAG 933.10 28S ribosomal RNA gene, partial sequence blastn 73927 1308 1 Eukaryota Sar     Chrysophyceae Chromulinales Chromulinaceae Ochromonas Ochromonas sp. SAG 933.10
3372285 3372285 PRJNA827593_P_NODE_52123_length_276_cov_1.418719_g51824_i0 PRJNA827593 52123 276 1.418719 3.91566444 Undaria pinnatifida 74381 SAR_Eukaryotes SAR_Eukaryotes 63.9 1.17e-5   NTclustered gi|1193824004|gb|KY400176.1| 74381 g51824 i0 97.297 0.134057971014493 37 1 13 0 151 187 211 175 Undaria pinnatifida microsatellite UPN4151 sequence blastn 37 63.9 1 Eukaryota Sar     Phaeophyceae Laminariales Alariaceae Undaria Undaria pinnatifida
3780189 3780189 PRJNA827593_P_NODE_13143_length_600_cov_5.106262_g12849_i0 PRJNA827593 13143 600 5.106262 30.637572 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 159 3.4e-34   NTclustered gi|93139321|gb|DQ361206.1| 127442 g12849 i0 86.395 16.9683333333333 147 19 25 1 407 553 614 469 Phytophthora insolita strain MG 41-3 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 10181 159 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora insolita
5924263 5924263 PRJNA827593_P_NODE_30025_length_378_cov_1.465574_g29726_i0 PRJNA827593 30025 378 1.465574 5.53986972 Phalacroma oxytoxoides 447216 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.003   NTclustered gi|2742502725|gb|PP905714.1| 447216 g29726 i0 96.97 0.174603174603175 33 1 9 0 345 377 1155 1187 Phalacroma oxytoxoides isolate PhaFC3 small subunit ribosomal RNA gene, partial sequence blastn 66 56.5 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae Phalacroma Phalacroma oxytoxoides
5924713 5924713 PRJNA827593_P_NODE_56025_length_264_cov_4.575916_g55726_i0 PRJNA827593 56025 264 4.575916 12.08041824 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 472 1.5599999999999998e-128   NTclustered gi|1837628855|gb|MN158348.1| 5909 g55726 i0 98.864 82.125 264 3 100 0 1 264 4257 4520 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 21681 472 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
7199041 7199041 PRJNA827593_P_NODE_21026_length_462_cov_2.778920_g20728_i0 PRJNA827593 21026 462 2.77892 12.8386104 Kentrophoros sp. 1 BS-2022 2930470 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.045   NTclustered gi|2261268989|emb|OX095830.1| 2930470 g20728 i0 100 0.0606060606060606 28 0 6 0 1 28 13 40 Kentrophoros sp. 1 BS-2022 partial 18S rRNA gene, isolate SAMEA13863266, clone N10:18S_rRNA::TRINITY_DN246_c0_g1_i2:46-1672(+) blastn 28 52.8 1 Eukaryota Sar   Ciliophora Karyorelictea Protostomatida Kentrophoridae Kentrophoros Kentrophoros sp. 1 BS-2022
7199946 7199946 PRJNA827593_P_NODE_7306_length_828_cov_3.249007_g7037_i0 PRJNA827593 7306 828 3.249007 26.90177796 Eucampia zodiacus 444606 SAR_Eukaryotes SAR_Eukaryotes 230 3.5799999999999995e-55   NTclustered gi|2026158947|ref|NC_054334.1| 444606 g7037 i0 78.329 50.1630434782609 383 64 45 16 454 824 30221 29846 Eucampia zodiacus strain CNS00060 mitochondrion, complete genome blastn 41535 230 1 Eukaryota Sar   Bacillariophyta Mediophyceae Hemiaulales Hemiaulaceae Eucampia Eucampia zodiacus
9749456 9749456 PRJNA827593_P_NODE_50488_length_281_cov_2.216346_g50189_i0 PRJNA827593 50488 281 2.216346 6.22793226 Trieres regia 1335017 SAR_Eukaryotes SAR_Eukaryotes 122 1.9499999999999994e-23   NTclustered gi|2055417059|ref|NC_056371.1| 1335017 g50189 i0 87.619 5.02491103202847 105 13 37 0 111 215 4369 4473 Odontella regia mitochondrion, complete genome blastn 1412 122 1 Eukaryota Sar   Bacillariophyta Mediophyceae Eupodiscales Parodontellaceae Trieres Trieres regia
10156897 10156897 PRJNA827593_P_NODE_37368_length_333_cov_2.346154_g37069_i0 PRJNA827593 37368 333 2.346154 7.81269282 Heterotrichida 5957 SAR_Eukaryotes SAR_Eukaryotes 134 1.09e-26   NTclustered gi|1820251590|gb|MT175584.1| 219168 g37069 i0 86.29 25.0840840840841 124 15 37 2 8 130 749 871 Peritromus kahli isolate CY2018101501 large subunit ribosomal RNA gene, partial sequence blastn 8353 135 0.992592592592593 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Peritromidae Peritromus Peritromus kahli
11025461 11025461 PRJNA827593_P_NODE_67369_length_242_cov_0.911243_g67070_i0 PRJNA827593 67369 242 0.911243 2.20520806 Polymyxa graminis 70182 SAR_Eukaryotes SAR_Eukaryotes 178 3.45e-40   NTclustered gi|20372910|emb|AJ457970.1| 70182 g67070 i0 89.116 0.607438016528926 147 11 61 5 96 242 367 226 Polymyxa graminis ORF1 DNA for hypothetical protein, clone pgV/4-9 blastn 147 178 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Polymyxa Polymyxa graminis
11432203 11432203 PRJNA827593_P_NODE_50829_length_280_cov_1.859903_g50530_i0 PRJNA827593 50829 280 1.859903 5.2077284 Poteriospumella 1117026 SAR_Eukaryotes SAR_Eukaryotes 496 9.92e-136   NTclustered gi|685431582|gb|KF697341.1| 1117027 g50530 i0 98.571 53.6214285714286 280 4 100 0 1 280 330 609 Poteriospumella lacustris strain JBC07 28S ribosomal RNA gene, partial sequence blastn 15014 496 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella lacustris
14849068 14849068 PRJNA827593_P_NODE_2912_length_1370_cov_5.294526_g2712_i0 PRJNA827593 2912 1370 5.294526 72.5350062 Lithodesmium undulatum 59812 SAR_Eukaryotes SAR_Eukaryotes 641 6.549999999999999e-179   NTclustered gi|2088237800|ref|NC_056903.1| 59812 g2712 i0 78.178 79.7496350364963 1054 196 76 28 24 1060 2034 3070 Lithodesmium undulatum mitochondrion, complete genome blastn 109257 641 1 Eukaryota Sar   Bacillariophyta Mediophyceae Lithodesmiales Lithodesmiaceae Lithodesmium Lithodesmium undulatum
15256283 15256283 PRJNA827593_P_NODE_13052_length_603_cov_3.183019_g12759_i0 PRJNA827593 13052 603 3.183019 19.19360457 root 1 Root_unresolved Root_unresolved 1051 0   NTclustered gi|937182978|gb|KR051079.1| 5865 g12759 i0 99.312 68.4875621890547 581 4 96 0 1 581 3293 3873 Babesia bovis transgenic clone Segment23 elongation factor 1 alpha (ef-1a) gene, complete cds; gfp-bsd gene, complete sequence; and exon blastn 41298 1057 0.994323557237465 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
16123421 16123421 PRJNA827593_P_NODE_16973_length_522_cov_1.494432_g16676_i0 PRJNA827593 16973 522 1.494432 7.80093504 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 427 7.279999999999998e-115   NTclustered gi|1004125725|gb|KU761582.1| 153251 g16676 i0 81.992 62.2241379310345 522 77 98 15 10 522 6586 6073 Cryptocaryon irritans isolate ND1410 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, and intergenic spacer, complete sequence blastn 32481 427 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans
16123855 16123855 PRJNA827593_P_NODE_40993_length_316_cov_8.045267_g40694_i0 PRJNA827593 40993 316 8.045267 25.42304372 Poteriospumella sp. 2003111 SAR_Eukaryotes SAR_Eukaryotes 579 1.0999999999999999e-160   NTclustered gi|1209404931|gb|KX442736.1| 2003111 g40694 i0 99.684 96.0632911392405 316 1 100 0 1 316 1444 1129 Poteriospumella sp. strain JBAS36 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 30356 579 1 Eukaryota Sar     Chrysophyceae Chromulinales Dinobryaceae Poteriospumella Poteriospumella sp.
17399785 17399785 PRJNA827593_P_NODE_52614_length_274_cov_2.199005_g52315_i0 PRJNA827593 52614 274 2.199005 6.0252737 Placocista sp. CC-Grouse Mountain 741089 SAR_Eukaryotes SAR_Eukaryotes 163 1.11e-35   NTclustered gi|290760485|gb|GQ144688.1| 741089 g52315 i0 89.922 44.2846715328467 129 10 63 3 148 274 2163 2036 Placocista sp. CC-Grouse Mountain large subunit ribosomal RNA gene, partial sequence blastn 12134 163 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Placocista Placocista sp. CC-Grouse Mountain
17805898 17805898 PRJNA827593_P_NODE_34814_length_347_cov_2.032847_g34515_i0 PRJNA827593 34814 347 2.032847 7.05397909 Bacillariophyceae 33849 SAR_Eukaryotes SAR_Eukaryotes 178 5.2e-40   NTclustered gi|699008555|ref|NC_024928.1| 1458866 g34515 i0 86.792 43.2881844380403 159 21 46 0 165 323 67547 67705 Eunotia naegelii chloroplast, complete genome blastn 15021 178 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Eunotiales Eunotiaceae Eunotia Eunotia naegelii
19080098 19080098 PRJNA827593_P_NODE_64015_length_246_cov_4.468208_g63716_i0 PRJNA827593 64015 246 4.468208 10.99179168 Cercozoa 136419 SAR_Eukaryotes SAR_Eukaryotes 100 7.82e-17   NTclustered gi|2008101406|gb|MW774215.1| 104657 g63716 i0 82.203 47.2764227642276 118 19 48 2 63 179 1783 1667 Wobblia lunata strain NIES-1015 large subunit ribosomal RNA gene, partial sequence blastn 11630 100 1 Eukaryota Sar     Bigyra Placidida Placidiaceae Wobblia Wobblia lunata
19947758 19947758 PRJNA827593_P_NODE_3876_length_1171_cov_2.469035_g3661_i0 PRJNA827593 3876 1171 2.469035 28.91239985 Nothophytophthora sp. 2853999 SAR_Eukaryotes SAR_Eukaryotes 263 5.070000000000001e-65   NTclustered gi|2240249467|gb|MW648547.1| 2853999 g3661 i0 81.677 23.6618274978651 322 54 27 5 5 325 10091 10408 Nothophytophthora sp. culture ICMP:18719 mitochondrion, complete genome blastn 27708 263 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Nothophytophthora Nothophytophthora sp.
21223390 21223390 PRJNA827593_P_NODE_46077_length_296_cov_36.085202_g45778_i0 PRJNA827593 46077 296 36.085202 106.81219792 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 508 1.36e-139   NTclustered gi|325194239|emb|FR825095.1| 890382 g45778 i0 98.611 102.060810810811 288 3 97 1 1 288 1176 890 Albugo laibachii Nc14, genomic contig CONTIG_1625_NC14_v4_1818_619 blastn 30210 508 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
22906009 22906009 PRJNA827593_P_NODE_59538_length_255_cov_1.631868_g59239_i0 PRJNA827593 59538 255 1.631868 4.1612634 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 346 9.49e-91   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g59239 i0 93.191 5.62352941176471 235 16 92 0 1 235 304 70 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1434 346 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24180034 24180034 PRJNA827593_P_NODE_48039_length_289_cov_3.194444_g47740_i0 PRJNA827593 48039 289 3.194444 9.23194316 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 501 2.21e-137   NTclustered gi|1837628855|gb|MN158348.1| 5909 g47740 i0 97.931 99.2768166089965 290 5 100 1 1 289 2667 2956 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 28691 501 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
25047966 25047966 PRJNA827593_P_NODE_64160_length_246_cov_1.786127_g63861_i0 PRJNA827593 64160 246 1.786127 4.39387242 Phytopythium vexans 907947 SAR_Eukaryotes SAR_Eukaryotes 399 6.889999999999999e-107   NTclustered gi|90655144|gb|DQ361265.1| 907947 g63861 i0 95.935 100 246 10 100 0 1 246 520 275 Pythium vexans large subunit ribosomal RNA gene, partial sequence blastn 24600 399 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Phytopythium Phytopythium vexans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;