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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA827593" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA827593 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12707806 12707806 PRJNA827593_P_NODE_12450_length_619_cov_2.587912_g12158_i0 PRJNA827593 12450 619 2.587912 16.01917528 Bacteria 2 Bacteria Bacteria 130 2.76e-25   NTclustered gi|2518596736|emb|OX639992.1| 265321 g12158 i0 94.186 14.7124394184168 86 4 14 1 478 562 4485286 4485371 MAG: uncultured Poribacteria bacterium isolate 2342930e-25dc-453b-b24c-d77caf5257d8 genome assembly, chromosome: 1 blastn 9107 130 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
16123677 16123677 PRJNA827593_P_NODE_31633_length_367_cov_1.370748_g31334_i0 PRJNA827593 31633 367 1.370748 5.03064516 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 56.5 0.003   NTclustered gi|1950818454|gb|CP066689.1| 2282149 g31334 i0 97.059 0.0926430517711172 34 0 9 1 270 303 109135 109103 MAG: Candidatus Roizmanbacteria bacterium isolate NC_groundwater_538_Ag_S-0.1um_35_236 chromosome blastn 34 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
17399217 17399217 PRJNA827593_P_NODE_21194_length_460_cov_2.224806_g20896_i0 PRJNA827593 21194 460 2.224806 10.2341076 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 56.5 0.003   NTclustered gi|1876390488|gb|CP058602.1| 2026804 g20896 i0 97.059 0.0739130434782609 34 0 7 1 93 125 107614 107647 MAG: Candidatus Woesebacteria bacterium isolate Ch104c chromosome, complete genome blastn 34 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
17806003 17806003 PRJNA827593_P_NODE_57934_length_259_cov_2.301075_g57635_i0 PRJNA827593 57934 259 2.301075 5.95978425 Bacteria 2 Bacteria Bacteria 446 9.26e-121   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g57635 i0 97.683 109.602316602317 259 6 100 0 1 259 800363 800621 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 28387 446 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
19080088 19080088 PRJNA827593_P_NODE_62515_length_249_cov_0.875000_g62216_i0 PRJNA827593 62515 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 56.5 0.002   NTclustered gi|2874254068|emb|OY970151.1| 179883 g62216 i0 100 0.903614457831325 30 0 12 0 23 52 126899 126928 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 225 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
19947312 19947312 PRJNA827593_P_NODE_13556_length_591_cov_1.965251_g13261_i0 PRJNA827593 13556 591 1.965251 11.61463341 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 158 1.2e-33   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g13261 i0 100 9.17258883248731 85 0 15 0 268 352 461418 461334 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 5421 158 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
21223425 21223425 PRJNA827593_P_NODE_4817_length_1036_cov_2.959502_g4584_i0 PRJNA827593 4817 1036 2.959502 30.66044072 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 161 1.67e-34   NTclustered gi|1474570736|gb|CP023991.1| 2026720 g4584 i0 97.849 1.72104247104247 93 2 9 0 765 857 568223 568131 Candidatus Saccharibacteria bacterium isolate CG19_WC_8_21_14_NA_150_51_44 chromosome, complete genome blastn 1783 161 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
23773464 23773464 PRJNA827593_P_NODE_28619_length_388_cov_2.333333_g28320_i0 PRJNA827593 28619 388 2.333333 9.05333204 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 100 1.31e-16   NTclustered gi|2874254068|emb|OY970151.1| 179883 g28320 i0 95.238 0.713917525773196 63 3 16 0 36 98 559906 559968 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 277 100 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;